RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 TMPRSS12Q86WS5 348 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 SCML4Q8N228 414 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 UBR7Q8N806 425 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 FIBINQ8TAL6 211 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 CLEC4CQ8WTT0 213 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 SPATA32Q96LK8 384 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 PRICKLE1Q96MT3 831 aaPredicted RBP16.96■□□□□ 0.31
NPC1-205ENST00000587163 DCBLD2Q96PD2 775 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 ELF4Q99607 663 aaPredicted RBP16.96■□□□□ 0.31
NPC1-205ENST00000587163 ZSWIM1Q9BR11 485 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 C10orf142B7Z368 130 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 ENC1O14682 589 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 CETN3O15182 167 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
NPC1-205ENST00000587163 SETSIPP0DME0 302 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 EPB41P11171 864 aaKnown RBP16.95■□□□□ 0.3
NPC1-205ENST00000587163 CTSOP43234 321 aaPredicted RBP16.95■□□□□ 0.3
NPC1-205ENST00000587163 SLC11A2P49281 568 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 RPS24P62847 133 aaKnown RBP16.95■□□□□ 0.3
NPC1-205ENST00000587163 DNAJC3Q13217 504 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 CST6Q15828 149 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 HNRNPA1L2Q32P51 320 aaKnown RBP16.95■□□□□ 0.3
NPC1-205ENST00000587163 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
NPC1-205ENST00000587163 FSCBQ5H9T9 825 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 TCERG1LQ5VWI1 586 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 LCLAT1Q6UWP7 414 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 MMS22LQ6ZRQ5 1243 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 MFN1Q8IWA4 741 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 UNC45BQ8IWX7 931 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 ENGASEQ8NFI3 743 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 SLC35F5Q8WV83 523 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 GOLPH3LQ9H4A5 285 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 SCML1Q9UN30 329 aa16.95■□□□□ 0.3
NPC1-205ENST00000587163 COL5A1P20908 1838 aaPredicted RBP16.95■□□□□ 0.3
NPC1-205ENST00000587163 A0A1W2PR77 199 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 TTC34A8MYJ7 566 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 IRAK2O43187 625 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 LDOC1O95751 146 aaPredicted RBP16.94■□□□□ 0.3
NPC1-205ENST00000587163 CALCAP01258 141 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 ITPKBP27987 946 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 TBX4P57082 545 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 LRMPQ12912 555 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 INAVAQ3KP66 663 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 NUGGCQ68CJ6 796 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 MMAAQ8IVH4 418 aaKnown RBP16.94■□□□□ 0.3
NPC1-205ENST00000587163 PIP4K2CQ8TBX8 421 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 SAP25Q8TEE9 199 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 AZIN2Q96A70 460 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 CNDP2Q96KP4 475 aaKnown RBP16.94■□□□□ 0.3
NPC1-205ENST00000587163 FCRL2Q96LA5 508 aaPredicted RBP16.94■□□□□ 0.3
NPC1-205ENST00000587163 FAM129BQ96TA1 746 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 IRX2Q9BZI1 471 aaPredicted RBP16.94■□□□□ 0.3
NPC1-205ENST00000587163 KIAA1257Q9ULG3 409 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 ERVW-1Q9UQF0 538 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 PCDHGA1Q9Y5H4 931 aa16.94■□□□□ 0.3
NPC1-205ENST00000587163 EIF4E1BA6NMX2 242 aaKnown RBP16.93■□□□□ 0.3
NPC1-205ENST00000587163 E9PAM4 449 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 RNF225M0QZC1 329 aaPredicted RBP16.93■□□□□ 0.3
NPC1-205ENST00000587163 RNASEH1O60930 286 aaKnown RBP16.93■□□□□ 0.3
NPC1-205ENST00000587163 RNASEH2AO75792 299 aaKnown RBP16.93■□□□□ 0.3
NPC1-205ENST00000587163 ZIC2O95409 532 aaPredicted RBP16.93■□□□□ 0.3
NPC1-205ENST00000587163 LTFP02788 710 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 PRB1P04280 392 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 FYNP06241 537 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 ITGAVP06756 1048 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 JUPP14923 745 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 CD38P28907 300 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 SLC8A1P32418 973 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 ABCG1P45844 678 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 ST8SIA6P61647 398 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 HSCBQ8IWL3 235 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 CFAP52Q8N1V2 620 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 CARNMT1Q8N4J0 409 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 AADATQ8N5Z0 425 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 EID2Q8N6I1 236 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 HJURPQ8NCD3 748 aaPredicted RBP16.93■□□□□ 0.3
NPC1-205ENST00000587163 OR2T34Q8NGX1 318 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 IRGQQ8WZA9 623 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 OMDQ99983 421 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
NPC1-205ENST00000587163 AASDHPPTQ9NRN7 309 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 ADAMTS1Q9UHI8 967 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 SLCO3A1Q9UIG8 710 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 KNTC1P50748 2209 aa16.93■□□□□ 0.3
NPC1-205ENST00000587163 LRRC72A6NJI9 287 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 TLX3O43711 291 aaPredicted RBP16.92■□□□□ 0.3
NPC1-205ENST00000587163 ZNF202O95125 648 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 ASLP04424 464 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 ABCB4P21439 1286 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 PRCPP42785 496 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 PMS1P54277 932 aaKnown RBP16.92■□□□□ 0.3
NPC1-205ENST00000587163 YWHAEP62258 255 aaKnown RBP16.92■□□□□ 0.3
NPC1-205ENST00000587163 BNIP3Q12983 259 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 TARDBPQ13148 414 aaKnown RBP eCLIP16.92■□□□□ 0.3
NPC1-205ENST00000587163 CNGA2Q16280 664 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 PITRM1Q5JRX3 1037 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 ANKRD40Q6AI12 368 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 TMEM270Q6UE05 265 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms