RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 MAMDC2Q7Z304 686 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 DSG4Q86SJ6 1040 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 PRPF39Q86UA1 669 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 FAM35AQ86V20 835 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 FBXO39Q8N4B4 442 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 C4orf32Q8N8J7 132 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 KLHDC7BQ96G42 594 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 SMARCD1Q96GM5 515 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 MED10Q9BTT4 135 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 MTG2Q9H4K7 406 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 OSER1Q9NX31 292 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 NCKIPSDQ9NZQ3 722 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 NUDT5Q9UKK9 219 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 PCDHB11Q9Y5F2 797 aa13.24□□□□□ -0.29
SMARCA4-211ENST00000586921 NAV3Q8IVL0 2385 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 UBE4BO95155 1302 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 SCAMP1O15126 338 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 PFKFB2O60825 505 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 ATP5BP06576 529 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 CORO1AP31146 461 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 MAT2AP31153 395 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 NUDT1P36639 197 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 SND1Q7KZF4 910 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 ADIPOR2Q86V24 386 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 ZC3H18Q86VM9 953 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 MMAAQ8IVH4 418 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 AHI1Q8N157 1196 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 SAAL1Q96ER3 474 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 ANKRD36BP1Q96IX9 119 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 PLIN2Q99541 437 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 KRT82Q9NSB4 513 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 ABCB8Q9NUT2 735 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 CUEDC1Q9NWM3 386 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 SEL1LQ9UBV2 794 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 DMTF1Q9Y222 760 aa13.23□□□□□ -0.29
SMARCA4-211ENST00000586921 A8MXQ7 604 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 SIN3BO75182 1162 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 VPS4BO75351 444 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 TACC1O75410 805 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 AP1G2O75843 785 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 NEBLO76041 1014 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 HMBSP08397 361 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 GOT1P17174 413 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 SLC8A1P32418 973 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 UGT1A5P35504 534 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 ZNF131P52739 623 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 EIF3IQ13347 325 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 SPIDRQ14159 915 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 POM121L1PQ3SYA9 428 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 MBLAC2Q68D91 279 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 ZCCHC8Q6NZY4 707 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 RAB11FIP2Q7L804 512 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 ZC3H3Q8IXZ2 948 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 AADATQ8N5Z0 425 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 ZSWIM2Q8NEG5 633 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 SNX21Q969T3 373 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 SYNDIG1Q9H7V2 258 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 EPB41L5Q9HCM4 733 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 PDE11AQ9HCR9 933 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 PDRG1Q9NUG6 133 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.22□□□□□ -0.295e-6■■□□□ 12
SMARCA4-211ENST00000586921 ARHGAP20Q9P2F6 1191 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 AGO1Q9UL18 857 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 VPS4AQ9UN37 437 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 CA5BQ9Y2D0 317 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 HIVEP1P15822 2718 aa13.22□□□□□ -0.29
SMARCA4-211ENST00000586921 SLC12A8A0AV02 714 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 PRAMEF26H0Y7S4 382 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 NVLO15381 856 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 SEMA7AO75326 666 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 PABPC1P11940 636 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 RARGP13631 454 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 GNLYP22749 145 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 HOXD9P28356 352 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 PSMD8P48556 350 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 MLLT10P55197 1068 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 CAPRIN2Q6IMN6 1127 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 GPBP1Q86WP2 473 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 DENND1CQ8IV53 801 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 CPXM2Q8N436 756 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 KCTD17Q8N5Z5 321 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 NOC3LQ8WTT2 800 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 FIZ1Q96SL8 496 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 CAAP1Q9H8G2 361 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 CYTH4Q9UIA0 394 aa13.21□□□□□ -0.29
SMARCA4-211ENST00000586921 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms