RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ABCC13Q9NSE7 274 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 FBXL12Q9NXK8 326 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 STIM2Q9P246 746 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 SUN2Q9UH99 717 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 ZDHHC9Q9Y397 364 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 HELZ2Q9BYK8 2649 aaKnown RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 A0A1W2PP55 124 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 FAM47DPA6NHR8 397 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 TTC34A8MYJ7 566 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 RNF225M0QZC1 329 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 PIK3R2O00459 728 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 ENC1O14682 589 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 ACSL4O60488 711 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 ATP5BP06576 529 aaKnown RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 LCP1P13796 627 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 CD19P15391 556 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 SYKP43405 635 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 ACADVLP49748 655 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 PMS1P54277 932 aaKnown RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 CST6Q15828 149 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 LCLAT1Q6UWP7 414 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 DHX40Q8IX18 779 aaKnown RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 FIBINQ8TAL6 211 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 PIP4K2CQ8TBX8 421 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 ACE2Q9BYF1 805 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 DNAI2Q9GZS0 605 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 NUCKS1Q9H1E3 243 aaKnown RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 ADAMTS1Q9UHI8 967 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 XPO7Q9UIA9 1087 aaKnown RBP12.34□□□□□ -0.43
BRCA1-225ENST00000586385 SLCO3A1Q9UIG8 710 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 RAI2Q9Y5P3 530 aa12.34□□□□□ -0.43
BRCA1-225ENST00000586385 COL5A1P20908 1838 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-225ENST00000586385 E9PAM4 449 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 SETSIPP0DME0 302 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 VDRP11473 427 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 ABCG1P45844 678 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 METAP1P53582 386 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 C21orf59P57076 290 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 SLC8A3P57103 927 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 PPP2CBP62714 309 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 PPP2CAP67775 309 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 FBXL19Q6PCT2 694 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
BRCA1-225ENST00000586385 SPATS2Q86XZ4 545 aaKnown RBP12.33□□□□□ -0.44
BRCA1-225ENST00000586385 MMAAQ8IVH4 418 aaKnown RBP12.33□□□□□ -0.44
BRCA1-225ENST00000586385 MFN1Q8IWA4 741 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 KAT5Q92993 513 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 AZIN2Q96A70 460 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 SLC39A13Q96H72 371 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 CNDP2Q96KP4 475 aaKnown RBP12.33□□□□□ -0.44
BRCA1-225ENST00000586385 IRX2Q9BZI1 471 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-225ENST00000586385 PRORYQ9H606 182 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 SCML1Q9UN30 329 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 ERVW-1Q9UQF0 538 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 PLXNA2O75051 1894 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 ITIH6Q6UXX5 1313 aa12.33□□□□□ -0.44
BRCA1-225ENST00000586385 PTPRQQ9UMZ3 2332 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 IRAK2O43187 625 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 DFNA5O60443 496 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 RFPL3O75679 317 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 RNASEH2AO75792 299 aaKnown RBP12.32□□□□□ -0.44
BRCA1-225ENST00000586385 LTFP02788 710 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
BRCA1-225ENST00000586385 VAV1P15498 845 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 EPHA8P29322 1005 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-225ENST00000586385 SLC8A1P32418 973 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 DRD3P35462 400 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 EIF2S3P41091 472 aaKnown RBP12.32□□□□□ -0.44
BRCA1-225ENST00000586385 CCR5P51681 352 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 ADPRHP54922 357 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 TBX4P57082 545 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 NXPH1P58417 271 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 LRMPQ12912 555 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 BNIP3Q12983 259 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
BRCA1-225ENST00000586385 DCAF6Q58WW2 860 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 MS4A13Q5J8X5 152 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 PITRM1Q5JRX3 1037 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 SFMBT2Q5VUG0 894 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 NUGGCQ68CJ6 796 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 APCDD1Q8J025 514 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 CFAP52Q8N1V2 620 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 EID2Q8N6I1 236 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 KDM1BQ8NB78 822 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 HJURPQ8NCD3 748 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-225ENST00000586385 OR2T34Q8NGX1 318 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 DQX1Q8TE96 717 aaKnown RBP12.32□□□□□ -0.44
BRCA1-225ENST00000586385 GANCQ8TET4 914 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 IRGQQ8WZA9 623 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 SLC35C1Q96A29 364 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 FAM131CQ96AQ9 280 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 NXPE2Q96DL1 559 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms