RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 SLC11A2P49281 568 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 TPI1P60174 286 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 DYNLT1P63172 113 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 OTUD4Q01804 1114 aaKnown RBP13.8□□□□□ -0.2
SPC24-202ENST00000585486 NOMO1Q15155 1222 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 FAM78AQ5JUQ0 283 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 Q7L0L9 218 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 BBS7Q8IWZ6 715 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 SMRP1Q8NCR6 262 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 SLCO2A1Q92959 643 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 TBC1D31Q96DN5 1066 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 ASB16Q96NS5 453 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 MYADMQ96S97 322 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
SPC24-202ENST00000585486 FAM118BQ9BPY3 351 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 TMEM248Q9NWD8 314 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 CLDND1Q9NY35 253 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 DNPEPQ9ULA0 475 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 VANGL2Q9ULK5 521 aa13.8□□□□□ -0.2
SPC24-202ENST00000585486 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 FGF10O15520 208 aaPredicted RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 CTIFO43310 598 aaKnown RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 ZFXP17010 805 aaPredicted RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 RHOQP17081 205 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 IGFBP4P22692 258 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 AVPR1AP37288 418 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 ATAT1Q5SQI0 421 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 UMODL1-AS1Q8N2C9 162 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 CPXM2Q8N436 756 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 RTL3Q8N8U3 475 aaKnown RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 NETO2Q8NC67 525 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 MYLIPQ8WY64 445 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 HAUS1Q96CS2 278 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 KRT12Q99456 494 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 FRMD8P1Q9BZ68 369 aaPredicted RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 ZYG11BQ9C0D3 744 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 USP29Q9HBJ7 922 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 GDE1Q9NZC3 331 aa13.79□□□□□ -0.2
SPC24-202ENST00000585486 DRG1Q9Y295 367 aaKnown RBP13.79□□□□□ -0.2
SPC24-202ENST00000585486 DENND4AQ7Z401 1863 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 GRXCR2A6NFK2 248 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 EFCAB8A8MWE9 144 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 TRDMT1O14717 391 aaKnown RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 CHRNA3P32297 505 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 KCNJ1P48048 391 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 NR2C2P49116 596 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 FNTAP49354 379 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 RPS24P62847 133 aaKnown RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 NAA30Q147X3 362 aaPredicted RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 KCTD19Q17RG1 926 aaPredicted RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 ODF2Q5BJF6 829 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 HABP4Q5JVS0 413 aaKnown RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 CHSY1Q86X52 802 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPC24-202ENST00000585486 TTC13Q8NBP0 860 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 MYRIPQ8NFW9 859 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 OR52K2Q8NGK3 314 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 SMARCD2Q92925 531 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 MAGOHBQ96A72 148 aaKnown RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 LRRC1Q9BTT6 524 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 SLITRK6Q9H5Y7 841 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 RETREG1Q9H6L5 497 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 C10orf88Q9H8K7 445 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 HOMER3Q9NSC5 361 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 CDH7Q9ULB5 785 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 ZNF510Q9Y2H8 683 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 ZFP37Q9Y6Q3 630 aaPredicted RBP13.78□□□□□ -0.2
SPC24-202ENST00000585486 DOCK4Q8N1I0 1966 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 BRWD1Q9NSI6 2320 aa13.78□□□□□ -0.2
SPC24-202ENST00000585486 F5H5T6 163 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 RAD51CO43502 376 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 ITGAVP06756 1048 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 VIPR2P41587 438 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 MRPS25P82663 173 aaKnown RBP13.77□□□□□ -0.21
SPC24-202ENST00000585486 GALNT2Q10471 571 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 XRCC4Q13426 336 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 SNX1Q13596 522 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 PRKD1Q15139 912 aaPredicted RBP13.77□□□□□ -0.21
SPC24-202ENST00000585486 RWDD4Q6NW29 188 aaKnown RBP13.77□□□□□ -0.21
SPC24-202ENST00000585486 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 CIR1Q86X95 450 aaPredicted RBP13.77□□□□□ -0.21
SPC24-202ENST00000585486 KLHL7Q8IXQ5 586 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 CFAP52Q8N1V2 620 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 CELF5Q8N6W0 485 aaKnown RBP13.77□□□□□ -0.21
SPC24-202ENST00000585486 GLIS1Q8NBF1 620 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 DOCK8Q8NF50 2099 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 NUP210Q8TEM1 1887 aaPredicted RBP13.77□□□□□ -0.21
SPC24-202ENST00000585486 LRRN4Q8WUT4 740 aa13.77□□□□□ -0.21
SPC24-202ENST00000585486 P3H4Q92791 437 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms