RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 SCNM1Q9BWG6 230 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 TMEM120AQ9BXJ8 343 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 ELAC1Q9H777 363 aaKnown RBP4.36□□□□□ -1.71
SKA2-210ENST00000584089 MOV10Q9HCE1 1003 aaKnown RBP4.36□□□□□ -1.71
SKA2-210ENST00000584089 NDUFAF4Q9P032 175 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 GRHPRQ9UBQ7 328 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 IPO11Q9UI26 975 aaKnown RBP4.36□□□□□ -1.71
SKA2-210ENST00000584089 TNFRSF18Q9Y5U5 241 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 ZNF335Q9H4Z2 1342 aaPredicted RBP4.36□□□□□ -1.71
SKA2-210ENST00000584089 F8W810 466 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 PRPF4O43172 522 aaKnown RBP eCLIP4.35□□□□□ -1.71
SKA2-210ENST00000584089 ALDOCP09972 364 aaKnown RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 PEPDP12955 493 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 CHKAP35790 457 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 PLCD1P51178 756 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 SHC2P98077 582 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 RNASELQ05823 741 aaKnown RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 RABEP1Q15276 862 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 RPS6KA2Q15349 733 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 RBMS2Q15434 407 aaKnown RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 TUBB8Q3ZCM7 444 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 ZNF793Q6ZN11 406 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 PAQR4Q8N4S7 273 aaPredicted RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 ARL14EPQ8N8R7 260 aaPredicted RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 MPLKIPQ8TAP9 179 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 TRAPPC12Q8WVT3 735 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 ATP2A3Q93084 1043 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 ZNF347Q96SE7 839 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 ARPC5LQ9BPX5 153 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 SORBS1Q9BX66 1292 aaKnown RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 SPRTNQ9H040 489 aaPredicted RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 TMLHEQ9NVH6 421 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 TMEM45AQ9NWC5 275 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 ELOVL5Q9NYP7 299 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 COPG1Q9Y678 874 aaKnown RBP4.35□□□□□ -1.71
SKA2-210ENST00000584089 LMTK3Q96Q04 1460 aa4.35□□□□□ -1.71
SKA2-210ENST00000584089 TCEA3O75764 348 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 VEGFAP15692 232 aaPredicted RBP4.34□□□□□ -1.71
SKA2-210ENST00000584089 CST5P28325 142 aaPredicted RBP4.34□□□□□ -1.71
SKA2-210ENST00000584089 SERPINA4P29622 427 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 PCP4P48539 62 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 TRAPPC10P48553 1259 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 B4GALNT1Q00973 533 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 LAMB3Q13751 1172 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 GALNTL6Q49A17 601 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 PIP4P1Q86T03 277 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.34□□□□□ -1.71
SKA2-210ENST00000584089 ADGRF4Q8IZF3 695 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 SLC2A12Q8TD20 617 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 CLEC4CQ8WTT0 213 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 SCARB1Q8WTV0 552 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 C3orf49Q96BT1 292 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 ZFYVE19Q96K21 471 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 TRAPPC9Q96Q05 1148 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 PIMREGQ9BSJ6 248 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 PAGR1Q9BTK6 254 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 TRMOQ9BU70 441 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 TXNRD2Q9NNW7 524 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 AGO2Q9UKV8 859 aaKnown RBP4.34□□□□□ -1.71
SKA2-210ENST00000584089 BAG5Q9UL15 447 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 LZTS1Q9Y250 596 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.34□□□□□ -1.71
SKA2-210ENST00000584089 PCDHA10Q9Y5I2 948 aa4.34□□□□□ -1.71
SKA2-210ENST00000584089 ZNF521Q96K83 1311 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 TRBV5-3A0A0A0MS03 114 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 KIR2DS5A0A0G2JLQ3 304 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 AGAP5A6NIR3 686 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 H0Y3Z8 333 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 KIR2DS3K7RE56 304 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 IPO5O00410 1097 aaKnown RBP4.33□□□□□ -1.72
SKA2-210ENST00000584089 SOCS2O14508 198 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 TLX3O43711 291 aaPredicted RBP4.33□□□□□ -1.72
SKA2-210ENST00000584089 UGDHO60701 494 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 HEXIM1O94992 359 aaKnown RBP4.33□□□□□ -1.72
SKA2-210ENST00000584089 TMEM191BP0C7N4 346 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 CYP19A1P11511 503 aaPredicted RBP4.33□□□□□ -1.72
SKA2-210ENST00000584089 PRF1P14222 555 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 LMO1P25800 156 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 GRK6P43250 576 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 NR4A2P43354 598 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 RCAN1P53805 252 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 ADPRHP54922 357 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 MTX1Q13505 466 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 DCTN1Q14203 1278 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 PGM5Q15124 567 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 TWIST1Q15672 202 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 GPR162Q16538 588 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 ISM2Q6H9L7 571 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 JMJD6Q6NYC1 403 aaPredicted RBP4.33□□□□□ -1.72
SKA2-210ENST00000584089 ERAP2Q6P179 960 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 MYCT1Q8N699 235 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 ENDOVQ8N8Q3 282 aaKnown RBP4.33□□□□□ -1.72
SKA2-210ENST00000584089 SLC44A5Q8NCS7 719 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 OR6Y1Q8NGX8 325 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 CLMNQ96JQ2 1002 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 PIGSQ96S52 555 aa4.33□□□□□ -1.72
SKA2-210ENST00000584089 OSBPL5Q9H0X9 879 aaPredicted RBP4.33□□□□□ -1.72
SKA2-210ENST00000584089 ABHD16BQ9H3Z7 469 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms