RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 UNC45AQ9H3U1 944 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 WASH6PQ9NQA3 447 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 DLL3Q9NYJ7 618 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 TFCP2L1Q9NZI6 479 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 DERAQ9Y315 318 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 RRP7AQ9Y3A4 280 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 LINC00473A8K010 186 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 B9A039 149 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 TSPAN3O60637 253 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 FAM163BP0C2L3 166 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 ELFN1P0C7U0 828 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 TMIGD3P0DMS9 266 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 ENGP17813 658 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 SCP2P22307 547 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 DUSP1P28562 367 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 PCP4P48539 62 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 DIO1P49895 249 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 UBE3AQ05086 875 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 GALNTL6Q49A17 601 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 CTXN3Q4LDR2 81 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 MAP3K21Q5TCX8 1036 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 FBXL22Q6P050 247 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 WDR93Q6P2C0 686 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 LVRNQ6Q4G3 990 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 ZNF66Q6ZN08 573 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 RRAGAQ7L523 313 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 SLC29A4Q7RTT9 530 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 C12orf76Q8N812 135 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 FAM71DQ8N9W8 422 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 FSIP1Q8NA03 581 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 CEP70Q8NHQ1 597 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 NPIPB3Q92617 1050 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 PIGSQ96S52 555 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 THAP7Q9BT49 309 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 TMEM98Q9Y2Y6 226 aa4.19□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3DA0A087WVF3 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3IA0A087WXS9 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3EA0A087X179 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3KA0A087X1G2 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3BA6NDS4 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3FA6NER0 549 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TTC34A8MYJ7 566 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3LB9A6J9 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 HOXC11O43248 304 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 AGR2O95994 175 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 ALDOAP04075 364 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 SLC3A2P08195 630 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 CYP3A4P08684 503 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 CNPP09543 421 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3HP0C7X1 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 CYP2D6P10635 497 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TNNT1P13805 278 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 JUPP14923 745 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 DRD4P21917 467 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 GRK5P34947 590 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 JAK3P52333 1124 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 RBM5P52756 815 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 CFHR3Q02985 330 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 RNASELQ05823 741 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 LMAN2Q12907 356 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TRPC3Q13507 836 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 SLC12A1Q13621 1099 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 PCID2Q5JVF3 399 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 L1TD1Q5T7N2 865 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 NAA35Q5VZE5 725 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 ANKRD40Q6AI12 368 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3GQ6DHY5 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3CQ6IPX1 549 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TMEM88Q6PEY1 159 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 BBS12Q6ZW61 710 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 RASGRP2Q7LDG7 609 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 RASAL3Q86YV0 1011 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TBC1D3Q8IZP1 549 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 ADPRHL1Q8NDY3 354 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 TMEM255BQ8WV15 326 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 COG8Q96MW5 612 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 SNX18Q96RF0 628 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 CDCP1Q9H5V8 836 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 VPS45Q9NRW7 570 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 GAR1Q9NY12 217 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 ST3GAL5Q9UNP4 418 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 ICKQ9UPZ9 632 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 SPATA31A1Q5TZJ5 1347 aa4.18□□□□□ -1.74
SMCHD1-209ENST00000583441 FER1L4A9Z1Z3 1794 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 FAM90A20PA6NIJ5 464 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 H7C1Q1 480 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 CA12O43570 354 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 KRT38O76015 456 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 PYGLP06737 847 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 CKMT1AP12532 417 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 ALADP13716 330 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 RXRAP19793 462 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 THBS3P49746 956 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 GPC5P78333 572 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 PSG6Q00889 435 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 DEUP1Q05D60 604 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 GLE1Q53GS7 698 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 CEP85Q6P2H3 762 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 KIRREL2Q6UWL6 708 aa4.17□□□□□ -1.74
SMCHD1-209ENST00000583441 GSG1LQ6UXU4 331 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms