RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 RPTORQ8N122 1335 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 A0A0U1RQJ8 604 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GOLGA6CA6NDK9 693 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 HMGB1P1B2RPK0 211 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 PODXLO00592 558 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 NDC80O14777 642 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 TRIM24O15164 1050 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 EPHB6O15197 1021 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 NRP2O60462 931 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 KPNA6O60684 536 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 RTN2O75298 545 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ALDH1A2O94788 518 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 PCDH8O95206 1070 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 LDHAP00338 332 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GOLGA6DP0CG33 693 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MYBP10242 640 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GYPEP15421 78 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 XPAP23025 273 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 KLRC1P26715 233 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 CCND2P30279 289 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 HOXD13P35453 343 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 LMAN1P49257 510 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GPR15P49685 360 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 VAMP7P51809 220 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ZNF280AP59817 542 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GPC5P78333 572 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GTF2BQ00403 316 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 OCRLQ01968 901 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 CYP4A11Q02928 519 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 BFSP1Q12934 665 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 BIRC3Q13489 604 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MTMR1Q13613 665 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 DHX34Q14147 1143 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 CTTNQ14247 550 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 KIF22Q14807 665 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 DRAP1Q14919 205 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 BRDTQ58F21 947 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 DNAJC21Q5F1R6 531 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GPR158Q5T848 1215 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 LAIR1Q6GTX8 287 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 CCDC174Q6PII3 467 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 Q6ZPA2 131 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MICALCLQ6ZW33 695 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 B4GALNT4Q76KP1 1039 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 RHOUQ7L0Q8 258 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ZNF571Q7Z3V5 609 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 DAAM2Q86T65 1068 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 RPUSD2Q8IZ73 545 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 SPICE1Q8N0Z3 855 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 RASGEF1CQ8N431 466 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GLB1L3Q8NCI6 653 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 C3orf20Q8ND61 904 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MCPH1Q8NEM0 835 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 SLC30A5Q8TAD4 765 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 NSUN6Q8TEA1 469 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 PIGOQ8TEQ8 1089 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 SCFD2Q8WU76 684 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ATRIPQ8WXE1 791 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 RFFLQ8WZ73 363 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GJA10Q969M2 543 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ZBED3Q96IU2 234 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 IFT74Q96LB3 600 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MPHOSPH6Q99547 160 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 LXNQ9BS40 222 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 STMN4Q9H169 189 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 WNT8AQ9H1J5 351 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ISCUQ9H1K1 167 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 TAF1DQ9H5J8 278 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MLXIPQ9HAP2 919 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 VEZTQ9HBM0 779 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 SLC38A10Q9HBR0 1119 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 AGO4Q9HCK5 861 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 EPB41L5Q9HCM4 733 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 ZCCHC17Q9NP64 241 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 HOMER3Q9NSC5 361 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 GOLGA6AQ9NYA3 693 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 HOXC10Q9NYD6 342 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 H2AFY2Q9P0M6 372 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 RASAL2Q9UJF2 1139 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 MTUS1Q9ULD2 1270 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 FZD1Q9UP38 647 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 UTP11Q9Y3A2 253 aaKnown RBP4.82□□□□□ -1.64
PTPRM-215ENST00000583289 PCDHA10Q9Y5I2 948 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 PPP2R3BQ9Y5P8 575 aa4.82□□□□□ -1.64
PTPRM-215ENST00000583289 NFASCO94856 1347 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 LRRIQ3A6PVS8 624 aaPredicted RBP4.81□□□□□ -1.64
PTPRM-215ENST00000583289 YDJCA8MPS7 323 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 GRXCR1A8MXD5 290 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 TMCO5BA8MYB1 307 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 F8VZ95 297 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 ATP2A1O14983 1001 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 ZNF185O15231 689 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 CLIC2O15247 247 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 CHMP2AO43633 222 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 BUB1O43683 1085 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 CEP104O60308 925 aa4.81□□□□□ -1.64
PTPRM-215ENST00000583289 MTA2O94776 668 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms