RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	LGI2	Q8N0V4	545 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	EHBP1	Q8NDI1	1231 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FIBIN	Q8TAL6	211 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RHBDD1	Q8TEB9	315 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ADAMTS14	Q8WXS8	1223 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MYO19	Q96H55	970 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	LMLN	Q96KR4	655 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SERPINB11	Q96P15	392 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GTPBP4	Q9BZE4	634 aa	Known RBP	12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SERGEF	Q9UGK8	458 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SUN2	Q9UH99	717 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CYTH4	Q9UIA0	394 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ANKRD6	Q9Y2G4	727 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CEP83	Q9Y592	693 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114		A0A1W2PP55	124 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	BICDL2	A1A5D9	508 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TTC34	A8MYJ7	566 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114		E5RJQ4	531 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TAF4	O00268	1085 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CAPN9	O14815	690 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MID1	O15344	667 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	P4HA2	O15460	535 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GADD45B	O75293	160 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	AFP	P02771	609 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ATXN1L	P0C7T5	689 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PITX1	P78337	314 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GCNT1	Q02742	428 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MORC3	Q14149	939 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	BECN1	Q14457	450 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TEAD4	Q15561	434 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MS4A13	Q5J8X5	152 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PITRM1	Q5JRX3	1037 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GJB7	Q6PEY0	223 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CHSY1	Q86X52	802 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MMAA	Q8IVH4	418 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TRIM59	Q8IWR1	403 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RPL10L	Q96L21	214 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DDX50	Q9BQ39	737 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CRACR2A	Q9BSW2	395 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SRRT	Q9BXP5	876 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PCED1A	Q9H1Q7	454 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FBRS	Q9HAH7	460 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FBXL12	Q9NXK8	326 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	COX16	Q9P0S2	106 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TJP2	Q9UDY2	1190 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	APOBEC2	Q9Y235	224 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TLR6	Q9Y2C9	796 aa		12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114		H0Y8X5	98 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PAPSS1	O43252	624 aa	Predicted RBP	12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	THAP12	O43422	761 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RNASEH2A	O75792	299 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	LUC7L3	O95232	432 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	APOE	P02649	317 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ZNF883	P0CG24	379 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	HOXB3	P14651	431 aa	Predicted RBP	12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CD27	P26842	260 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	USP8	P40818	1118 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PPP1R2	P41236	205 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PSMD8	P48556	350 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	STK19	P49842	368 aa	Predicted RBP	12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	APBA1	Q02410	837 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ZBTB16	Q05516	673 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PAK1	Q13153	545 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TAF5	Q15542	800 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CST6	Q15828	149 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	HNRNPA1L2	Q32P51	320 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PRAMEF14	Q5SWL7	426 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	NCEH1	Q6PIU2	408 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	APCDD1	Q8J025	514 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	AZIN2	Q96A70	460 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TTC17	Q96AE7	1141 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SLC39A13	Q96H72	371 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MRGPRX3	Q96LB0	322 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SLC6A18	Q96N87	628 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	NEUROG2	Q9H2A3	272 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PABPC3	Q9H361	631 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SGK2	Q9HBY8	427 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TOR4A	Q9NXH8	423 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SLCO3A1	Q9UIG8	710 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ERVW-1	Q9UQF0	538 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	NCKAP1	Q9Y2A7	1128 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PLXNA2	O75051	1894 aa		12.04	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PLXNB3	Q9ULL4	1909 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FAM221B	A6H8Z2	402 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FLRT2	O43155	660 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SART1	O43290	800 aa	Known RBP	12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RNASEH1	O60930	286 aa	Known RBP	12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ASL	P04424	464 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	IGHV4-34	P06331	123 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	VAV1	P15498	845 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PDGFRA	P16234	1089 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TACR2	P21452	398 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GNA15	P30679	374 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ACADSB	P45954	432 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms