RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TMPRSS6Q8IU80 811 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TMEFF1Q8IYR6 380 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 LGI2Q8N0V4 545 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 RNF34Q969K3 372 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SPAG5Q96R06 1193 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NPY6RQ99463 290 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NUP58Q9BVL2 599 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 MKRN2Q9H000 416 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 STIM2Q9P246 746 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SUSD2Q9UGT4 822 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NOCTQ9UK39 431 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PILRBQ9UKJ0 227 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SCML1Q9UN30 329 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SIK3Q9Y2K2 1263 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 RAD54BQ9Y620 910 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TARSL2A2RTX5 802 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TCAF2A6NFQ2 919 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 H0Y626 953 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TM4SF5O14894 197 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 GDF9O60383 454 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NDUFS2O75306 463 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CCDC172P0C7W6 258 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 ACADMP11310 421 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PTGER3P43115 390 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CXCR3P49682 368 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PLK1P53350 603 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 COPAP53621 1224 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NOMO3P69849 1222 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 ZNF33AQ06730 810 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NCAPHQ15003 741 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PTPRNQ16849 979 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 DUOXA1Q1HG43 343 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SLC25A52Q3SY17 297 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 C5orf22Q49AR2 442 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 WDR45BQ5MNZ6 344 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 RAP1GAP2Q684P5 730 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CARNMT1Q8N4J0 409 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SORCS1Q8WY21 1168 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PIGKQ92643 395 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 FAM207AQ9NSI2 230 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 WSB2Q9NYS7 404 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CYP8B1Q9UNU6 501 aa13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 MUC22E2RYF6 1773 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CNOT1A5YKK6 2376 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-222ENST00000581708 ITIH6Q6UXX5 1313 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 LNP1A1A4G5 178 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SMTNL1A8MU46 457 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 M0QYT0 321 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CLDN11O75508 207 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CYP1A1P04798 512 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 MMP8P22894 467 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NNMTP40261 264 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CSKP41240 450 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TPMTP51580 245 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PITX1P78337 314 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 UBXN1Q04323 297 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SYCP1Q15431 976 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CCDC6Q16204 474 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 HNRNPA1L2Q32P51 320 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 FAM102AQ5T9C2 384 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 DAB2IPQ5VWQ8 1189 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 XYLT1Q86Y38 959 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 FRMD1Q8N878 549 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 WFDC5Q8TCV5 224 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 DNASE2BQ8WZ79 361 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 C1orf74Q96LT6 269 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 RETREG1Q9H6L5 497 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 WDCPQ9H6R7 721 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 ARHGEF38Q9NXL2 777 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 MYO6Q9UM54 1294 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SLC6A14Q9UN76 642 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CEP192Q8TEP8 1941 aa13□□□□□ -0.33
CDK5RAP3-222ENST00000581708 GON4LQ3T8J9 2241 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 RNASEH1O60930 286 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 GRAP2O75791 330 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 GFPT2O94808 682 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 MMEP08473 750 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SERPINF2P08697 491 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 GNSP15586 552 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PTMSP20962 102 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 ITPKAP23677 461 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 GSCP56915 257 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 ECT2LQ008S8 904 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 NME3Q13232 169 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 AUHQ13825 339 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PLEKHG6Q3KR16 790 aa12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TTC31Q49AM3 519 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TRIM61Q5EBN2 209 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms