RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 DCDC5Q6ZRR9 648 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 FSIP1Q8NA03 581 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 HERVK_113Q902F9 699 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 CCDC17Q96LX7 622 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 FCRL4Q96PJ5 515 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 SEMA4CQ9C0C4 833 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 IFT80Q9P2H3 777 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 PGAP2Q9UHJ9 254 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 CRYL1Q9Y2S2 319 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 ZNF521Q96K83 1311 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 TCRBV5S1A1TA0A578 114 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 TTC34A8MYJ7 566 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 TISP43B9A030 160 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 WDHD1O75717 1129 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 KAT7O95251 611 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 SLC8A1P32418 973 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 TLE3Q04726 772 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 UBE3AQ05086 875 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 KCNB1Q14721 858 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 DLGAP5Q15398 846 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 CNGA3Q16281 694 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 AWAT1Q58HT5 328 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 ZNF484Q5JVG2 852 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 KIAA1324Q6UXG2 1013 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 RASGRP2Q7LDG7 609 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 ADAMTS18Q8TE60 1221 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 REPS1Q96D71 796 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 KTI12Q96EK9 354 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 RBM17Q96I25 401 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 PIGSQ96S52 555 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 SH2D3AQ9BRG2 576 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 ARHGAP39Q9C0H5 1083 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 NOD2Q9HC29 1040 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 TMLHEQ9NVH6 421 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 ASNSD1Q9NWL6 643 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 GAR1Q9NY12 217 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 PDP2Q9P2J9 529 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 GJD2Q9UKL4 321 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 B3GNT3Q9Y2A9 372 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 DNAJC16Q9Y2G8 782 aa5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 COL3A1P02461 1466 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-205ENST00000581383 WIPF3A6NGB9 483 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 H3BNC9 293 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 EYA2O00167 538 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 PRYO14603 147 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 SEPT4O43236 478 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 ALDOAP04075 364 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 CPA1P15085 419 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 CHN1P15882 459 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 STAT6P42226 847 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 PCP4P48539 62 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 MCM2P49736 904 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 VPS41P49754 854 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 CCT4P50991 539 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 CCR5P51681 352 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 ETFDHQ16134 617 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 CTXN3Q4LDR2 81 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 TMEM63BQ5T3F8 832 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 TMTC1Q8IUR5 882 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 ESX1Q8N693 406 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 PNLDC1Q8NA58 520 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 SRFBP1Q8NEF9 429 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 LINS1Q8NG48 757 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 SLC2A12Q8TD20 617 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 ARRDC3Q96B67 414 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 FYTTD1Q96QD9 318 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 TWNKQ96RR1 684 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 PDE11AQ9HCR9 933 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 RASSF1Q9NS23 344 aa5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 COPG1Q9Y678 874 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-205ENST00000581383 A0A1B0GVC2 190 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 C16orf96A6NNT2 1141 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 H7C1Q1 480 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 PPP6CO00743 305 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 HNRNPRO43390 633 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 SFPQP23246 707 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 NDUFS1P28331 727 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 HOXD12P35452 270 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 SLC14A1Q13336 389 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 LARS2Q15031 903 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 ANKRD1Q15327 319 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 CC2D1BQ5T0F9 858 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 JAKMIP3Q5VZ66 844 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 SLC18B1Q6NT16 456 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 MIS18BP1Q6P0N0 1132 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 VSTM1Q6UX27 236 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 RANBP10Q6VN20 620 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 SLC39A5Q6ZMH5 540 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 C1QL2Q7Z5L3 287 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 LAS2Q8IYD9 372 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 PTGR2Q8N8N7 351 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 IL17REQ8NFR9 667 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 PNISRQ8TF01 805 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 STAMQ92783 540 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 ZBTB9Q96C00 473 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 HIC2Q96JB3 615 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 GPR78Q96P69 363 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 HERC2P3Q9BVR0 1158 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 RNF26Q9BY78 433 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms