RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CFAP57Q96MR6 1250 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 HHIPQ96QV1 700 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 CNPY3Q9BT09 278 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ARHGEF4Q9NR80 690 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 PIGVQ9NUD9 493 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 DEC1Q9P2X7 70 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 EPN1Q9Y6I3 576 aaPredicted RBP10.24□□□□□ -0.77
GGA3-209ENST00000580646 WDR87Q6ZQQ6 2873 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 DMXL1Q9Y485 3027 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 TBC1D3BA6NDS4 549 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 CCP110O43303 1012 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 ATMINO43313 823 aaPredicted RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 TULP3O75386 442 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 RPP40O75818 363 aaKnown RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 MTA2O94776 668 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 NDUFA10O95299 355 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 IPO7O95373 1038 aaKnown RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 APBB3O95704 486 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 HMBSP08397 361 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 ABCB4P21439 1286 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 TGM1P22735 817 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 TNFRSF4P43489 277 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 KDSRQ06136 332 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 SCAPQ12770 1279 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 PIGHQ14442 188 aaPredicted RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 SPA17Q15506 151 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 PREPLQ4J6C6 727 aaPredicted RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 MPPE1Q53F39 396 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 FAM133BQ5BKY9 247 aaKnown RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 ZC3H12AQ5D1E8 599 aaKnown RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 EMC10Q5UCC4 262 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 TTC39BQ5VTQ0 682 aaPredicted RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 RHOT2Q8IXI1 618 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 PHTF2Q8N3S3 785 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 CCDC33Q8N5R6 958 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 NIPA2Q8N8Q9 360 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 ZNF557Q8N988 423 aaPredicted RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 FAM172AQ8WUF8 416 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 GAB3Q8WWW8 586 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 NTAN1Q96AB6 310 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 PDLIM2Q96JY6 352 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 CALR3Q96L12 384 aaKnown RBP10.23□□□□□ -0.77
GGA3-209ENST00000580646 C1orf74Q96LT6 269 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 HAPLN3Q96S86 360 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 WDCPQ9H6R7 721 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 SPTLC3Q9NUV7 552 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 CALCOCO1Q9P1Z2 691 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 EBF1Q9UH73 591 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 MMP17Q9ULZ9 603 aa10.23□□□□□ -0.77
GGA3-209ENST00000580646 MYO18AQ92614 2054 aaKnown RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 CFAP47Q6ZTR5 3102 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 A0A0A6YYK5 440 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 SOWAHDA6NJG2 315 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 ARHGAP6O43182 974 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 CACNG3O60359 315 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 GJB6O95452 261 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 PENKP01210 267 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 CYBBP04839 570 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 CHRM1P11229 460 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 TYRP14679 529 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 TFE3P19532 575 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 PCK1P35558 622 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 TIE1P35590 1138 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 KIR2DL1P43626 348 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 HADHBP55084 474 aaKnown RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 HDAC4P56524 1084 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 ATP11AP98196 1134 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 OGDHQ02218 1023 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 NRG1Q02297 640 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 ZNF252P-AS1Q0IIN9 211 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 SPEM2Q0P670 501 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 NME3Q13232 169 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 C15orf59Q2T9L4 293 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 ARL13BQ3SXY8 428 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 C5orf22Q49AR2 442 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 HSF5Q4G112 596 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 PIK3R6Q5UE93 754 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 FYB2Q5VWT5 728 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 TPGS1Q6ZTW0 290 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 NUDT18Q6ZVK8 323 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 PHLDB2Q86SQ0 1253 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 DNAAF5Q86Y56 855 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 TXLNBQ8N3L3 684 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 ALLCQ8N6M5 410 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 IL17RCQ8NAC3 791 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 TXNDC5Q8NBS9 432 aaKnown RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 TSTD1Q8NFU3 115 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 ZNF564Q8TBZ8 553 aaPredicted RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 RFFLQ8WZ73 363 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 RNF34Q969K3 372 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 RMDN1Q96DB5 314 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 ARHGEF26Q96DR7 871 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 XPO6Q96QU8 1125 aaKnown RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 PRMT1Q99873 361 aaKnown RBP10.22□□□□□ -0.77
GGA3-209ENST00000580646 NUP85Q9BW27 656 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 BBS2Q9BXC9 721 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 SLC2A11Q9BYW1 496 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 TKTL2Q9H0I9 626 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms