RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 KDELR1P24390 212 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 HOXC13P31276 330 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 PTPN7P35236 360 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 EIF2DP41214 584 aaKnown RBP12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 SEMA3BQ13214 749 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 SLC12A1Q13621 1099 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 DHCR24Q15392 516 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 PPP2R5EQ16537 467 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 TJAP1Q5JTD0 557 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 DAB2IPQ5VWQ8 1189 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 NADSYN1Q6IA69 706 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 TMCO3Q6UWJ1 677 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 ZNF783Q6ZMS7 281 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 TPGS1Q6ZTW0 290 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 SETD3Q86TU7 594 aaPredicted RBP12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 UBALD2Q8IYN6 164 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 SLC44A3Q8N4M1 653 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 FAM71BQ8TC56 605 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 RSPRY1Q96DX4 576 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 PBKQ96KB5 322 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 KCTD15Q96SI1 283 aaPredicted RBP12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 ECT2Q9H8V3 914 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 RAD54BQ9Y620 910 aa12.11□□□□□ -0.47
SNORD3C-201ENST00000580533 DOCK6Q96HP0 2047 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 C19orf67A6NJJ6 358 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 WASH4PA8MWX3 477 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 KCNK3O14649 394 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 TSPAN3O60637 253 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 TBL1XO60907 577 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 TJP3O95049 919 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 LUC7L3O95232 432 aaKnown RBP12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 PENKP01210 267 aaPredicted RBP12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 CYP17A1P05093 508 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 TYRP14679 529 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 OR1E1P30953 314 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 SLC6A4P31645 630 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 PEX5P50542 639 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 DPYSL3Q14195 570 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 RAB6CQ53S08 254 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 LY6G5CQ5SRR4 150 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 MANEALQ5VSG8 457 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 RFWD3Q6PCD5 774 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 POTEHQ6S545 545 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 CSPG4P5Q96PW8 444 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 RAB6CQ9H0N0 254 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 EBF3Q9H4W6 596 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 L2HGDHQ9H9P8 463 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 SLC2A4RGQ9NR83 387 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 TMEM248Q9NWD8 314 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 GPATCH2LQ9NWQ4 482 aa12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 XPO7Q9UIA9 1087 aaKnown RBP12.1□□□□□ -0.47
SNORD3C-201ENST00000580533 DOCK8Q8NF50 2099 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 MAN2B1O00754 1011 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 APOL1O14791 398 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 NCAM2O15394 837 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 CACNG3O60359 315 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 BMP1P13497 986 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 TCF4P15884 667 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 PRLRP16471 622 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 GOT1P17174 413 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 MX2P20592 715 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 DNA2P51530 1060 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 VCPP55072 806 aaKnown RBP12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 TUBB2AQ13885 445 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 DMC1Q14565 340 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 FYB2Q5VWT5 728 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 RHBDF2Q6PJF5 856 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 SPOCD1Q6ZMY3 1216 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 RALGPS2Q86X27 583 aaPredicted RBP12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 RFX6Q8HWS3 928 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 LRRC49Q8IUZ0 686 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.09□□□□□ -0.479e-9■■□□□ 12.1
SNORD3C-201ENST00000580533 PYROXD2Q8N2H3 581 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 CARNMT1Q8N4J0 409 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 RTL3Q8N8U3 475 aaKnown RBP12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 TTC13Q8NBP0 860 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 WFIKKN2Q8TEU8 576 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 TSC1Q92574 1164 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 KRT35Q92764 455 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 WBP2Q969T9 261 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 SHDQ96IW2 340 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 LRRC3BQ96PB8 259 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 TUBB2BQ9BVA1 445 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 PLA2G2FQ9BZM2 168 aa12.09□□□□□ -0.47
SNORD3C-201ENST00000580533 LINC00597Q9H2U6 94 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms