RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 SMOC1Q9H4F8 434 aa20.83■□□□□ 0.93
SMG8-204ENST00000580498 TMEM9BQ9NQ34 198 aa20.83■□□□□ 0.93
SMG8-204ENST00000580498 DNTTP04053 509 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 CFIP05156 583 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 CCDC172P0C7W6 258 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 COPB1P53618 953 aaKnown RBP20.82■□□□□ 0.92
SMG8-204ENST00000580498 RNASE9P60153 205 aaKnown RBP20.82■□□□□ 0.92
SMG8-204ENST00000580498 UBXN1Q04323 297 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 ZBTB16Q05516 673 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 SULT2A1Q06520 285 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 TAF5Q15542 800 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 ADIPOR2Q86V24 386 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 P2RY11Q96G91 374 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 HSPA12BQ96MM6 686 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 PRICKLE1Q96MT3 831 aaPredicted RBP20.82■□□□□ 0.92
SMG8-204ENST00000580498 NAA15Q9BXJ9 866 aaKnown RBP20.82■□□□□ 0.92
SMG8-204ENST00000580498 ITM2CQ9NQX7 267 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 CEP192Q8TEP8 1941 aa20.82■□□□□ 0.92
SMG8-204ENST00000580498 A0A1B0GVM2 712 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 TCAF2A6NFQ2 919 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 SMTNL1A8MU46 457 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 GFPT2O94808 682 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 SRPRAP08240 638 aaKnown RBP20.81■□□□□ 0.92
SMG8-204ENST00000580498 SYPP08247 313 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 CD70P32970 193 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 SOX5P35711 763 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 PTGER3P43115 390 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 SULT1E1P49888 294 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 GFPT1Q06210 699 aaPredicted RBP20.81■□□□□ 0.92
SMG8-204ENST00000580498 CAMK2GQ13555 558 aaPredicted RBP20.81■□□□□ 0.92
SMG8-204ENST00000580498 FILIP1LQ4L180 1135 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 BRMS1LQ5PSV4 323 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 TMEM215Q68D42 235 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 TCEAL6Q6IPX3 200 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 CFAP52Q8N1V2 620 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 KDM1BQ8NB78 822 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 TCEAL3Q969E4 200 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 RPRD1AQ96P16 312 aaPredicted RBP20.81■□□□□ 0.92
SMG8-204ENST00000580498 TMEM245Q9H330 911 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 WDCPQ9H6R7 721 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 CD248Q9HCU0 757 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 USP36Q9P275 1121 aaKnown RBP20.81■□□□□ 0.92
SMG8-204ENST00000580498 LIMA1Q9UHB6 759 aaKnown RBP20.81■□□□□ 0.92
SMG8-204ENST00000580498 NCKAP1Q9Y2A7 1128 aa20.81■□□□□ 0.92
SMG8-204ENST00000580498 CKAP5Q14008 2032 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 LGALS16A8MUM7 142 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 HLA-EP13747 358 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 CSKP41240 450 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 DEUP1Q05D60 604 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 TYRO3Q06418 890 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 PPM1JQ5JR12 505 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 PITRM1Q5JRX3 1037 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 LRRC31Q6UY01 552 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 DEFB119Q8N690 84 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 FRMD1Q8N878 549 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 CADM4Q8NFZ8 388 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 EPS8L1Q8TE68 723 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 TTC17Q96AE7 1141 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 TOE1Q96GM8 510 aaKnown RBP20.8■□□□□ 0.92
SMG8-204ENST00000580498 MKRN2Q9H000 416 aaKnown RBP20.8■□□□□ 0.92
SMG8-204ENST00000580498 SLC6A17Q9H1V8 727 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 NLRC4Q9NPP4 1024 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 PILRBQ9UKJ0 227 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 SCML1Q9UN30 329 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 SLC6A14Q9UN76 642 aa20.8■□□□□ 0.92
SMG8-204ENST00000580498 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.79■□□□□ 0.92
SMG8-204ENST00000580498 LNP1A1A4G5 178 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 DESP17661 470 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 ITPKAP23677 461 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 GABRB2P47870 512 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 TPMTP51580 245 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 ECT2LQ008S8 904 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 CDR2Q01850 454 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 ZNF177Q13360 481 aaPredicted RBP20.79■□□□□ 0.92
SMG8-204ENST00000580498 NAA35Q5VZE5 725 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 ZNF776Q68DI1 518 aaPredicted RBP20.79■□□□□ 0.92
SMG8-204ENST00000580498 SLC23A3Q6PIS1 610 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 NOP9Q86U38 636 aaKnown RBP20.79■□□□□ 0.92
SMG8-204ENST00000580498 PCED1AQ9H1Q7 454 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 GANQ9H2C0 597 aa20.79■□□□□ 0.92
SMG8-204ENST00000580498 WSB2Q9NYS7 404 aaPredicted RBP20.79■□□□□ 0.92
SMG8-204ENST00000580498 ATXN2Q99700 1313 aaKnown RBP20.78■□□□□ 0.92
SMG8-204ENST00000580498 DMXL1Q9Y485 3027 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 GOLGA8SH3BPF8 625 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 MMEP08473 750 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 PTMSP20962 102 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 TPM4P67936 248 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 DPY19L2P1Q6NXN4 242 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 CACUL1Q86Y37 369 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 CCAR2Q8N163 923 aaKnown RBP20.78■□□□□ 0.92
SMG8-204ENST00000580498 HDDC3Q8N4P3 179 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 AOPEPQ8N6M6 819 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 WFDC5Q8TCV5 224 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 GANCQ8TET4 914 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 ZNF419Q96HQ0 510 aaPredicted RBP20.78■□□□□ 0.92
SMG8-204ENST00000580498 GPR174Q9BXC1 333 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 XPO7Q9UIA9 1087 aaKnown RBP20.78■□□□□ 0.92
SMG8-204ENST00000580498 SLC25A13Q9UJS0 675 aa20.78■□□□□ 0.92
SMG8-204ENST00000580498 EDDM13A0A1B0GTR0 161 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 TARSL2A2RTX5 802 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms