RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	MIB2	Q96AX9	1013 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	ATXN7L3B	Q96GX2	97 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	DUSP9	Q99956	384 aa	Known RBP	6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	CCSER1	Q9C0I3	900 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	NACA2	Q9H009	215 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	ARHGAP28	Q9P2N2	729 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	DKK3	Q9UBP4	350 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	DMGDH	Q9UI17	866 aa	Known RBP	6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	RNF112	Q9ULX5	631 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	RP1	P56715	2156 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	NAV3	Q8IVL0	2385 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	SCN8A	Q9UQD0	1980 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	TRIM38	O00635	465 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	HUS1	O60921	280 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	WNT1	P04628	370 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ITGA2B	P08514	1039 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	HMGB1	P09429	215 aa	Known RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	CISD3	P0C7P0	127 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	IRF1	P10914	325 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	CKMT1A	P12532	417 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	XBP1	P17861	261 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ACO1	P21399	889 aa	Known RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ACAT1	P24752	427 aa	Known RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	PCSK1	P29120	753 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	NOS3	P29474	1203 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	LHX1	P48742	406 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	NXPH1	P58417	271 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	NUCB1	Q02818	461 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	GOLGA8F	Q08AF8	430 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	GOLGA8DP	Q0D2H9	430 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	IFRD2	Q12894	506 aa	Predicted RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	TAF10	Q12962	218 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ENPP2	Q13822	863 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ZNF234	Q14588	700 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	PERM1	Q5SV97	790 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	TTC22	Q5TAA0	569 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	BORA	Q6PGQ7	559 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	SERPINA13P	Q6UXR4	307 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	HEATR4	Q86WZ0	1026 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	SMC5	Q8IY18	1101 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	TMEM86A	Q8N2M4	240 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	PDZD8	Q8NEN9	1154 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ERMN	Q8TAM6	284 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	GANC	Q8TET4	914 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	BICD1	Q96G01	975 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	PRR11	Q96HE9	360 aa	Predicted RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ZNF560	Q96MR9	790 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ORAI3	Q9BRQ5	295 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	TTLL2	Q9BWV7	592 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	RWDD1	Q9H446	243 aa	Predicted RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	FBRS	Q9HAH7	460 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	C17orf75	Q9HAS0	396 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	USP29	Q9HBJ7	922 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	LRWD1	Q9UFC0	647 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	LSM7	Q9UK45	103 aa	Known RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	DERA	Q9Y315	318 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	ENTPD2	Q9Y5L3	495 aa		6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	SETD2	Q9BYW2	2564 aa	Predicted RBP	6.31	□□□□□ -1.4
KPNB1-209	ENST00000580158	COL27A1	Q8IZC6	1860 aa	Predicted RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	CCDC187	A0A096LP49	1063 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158		A0A1B0GVM2	712 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	LRRC72	A6NJI9	287 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	OGT	O15294	1046 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	SLC16A4	O15374	487 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	MTSS1	O43312	755 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	COCH	O43405	550 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	TIMM44	O43615	452 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	SDC3	O75056	442 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	MED24	O75448	989 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	IGHV4-34	P06331	123 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	CENPB	P07199	599 aa	Predicted RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	LIPC	P11150	499 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	MUT	P22033	750 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	RPA1	P27694	616 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	SLC5A2	P31639	672 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	PNPLA4	P41247	253 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	IDH3A	P50213	366 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	POLE2	P56282	527 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	NOP14	P78316	857 aa	Known RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	CYP4F2	P78329	520 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	KRT32	Q14532	448 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	TGIF1	Q15583	401 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	MAPRE1	Q15691	268 aa	Known RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	HECTD3	Q5T447	861 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	C1QL3	Q5VWW1	255 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	RBM44	Q6ZP01	1051 aa	Known RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158		Q6ZUG5	572 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	HTR3D	Q70Z44	454 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	JAML	Q86YT9	394 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	OR4C6	Q8NH72	309 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	C9orf43	Q8TAL5	461 aa	Predicted RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	GOLGA1	Q92805	767 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	GTF3C6	Q969F1	213 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	SERAC1	Q96JX3	654 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	FUCA2	Q9BTY2	467 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	LSG1	Q9H089	658 aa	Known RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	BHMT2	Q9H2M3	363 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	DPP3	Q9NY33	737 aa		6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	TPX2	Q9ULW0	747 aa	Known RBP	6.3	□□□□□ -1.4
KPNB1-209	ENST00000580158	SCML1	Q9UN30	329 aa		6.3	□□□□□ -1.4

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