RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 WBP2Q969T9 261 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZFYVE19Q96K21 471 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 LRRC3BQ96PB8 259 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PEBP4Q96S96 227 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PRMT1Q99873 361 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZNF670Q9BS34 389 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CALN1Q9BXU9 219 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RAB6CQ9H0N0 254 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 EBF3Q9H4W6 596 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 C8orf33Q9H7E9 229 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ECT2Q9H8V3 914 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PRDM16Q9HAZ2 1276 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SLC2A4RGQ9NR83 387 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DUSP12Q9UNI6 340 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 JRKLQ9Y4A0 524 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 HYOU1Q9Y4L1 999 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PCDHA3Q9Y5H8 950 aa11.63□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZNF318Q5VUA4 2279 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 COL4A3Q01955 1670 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 LRRD1A4D1F6 860 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZNF487B1APH4 448 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 H0Y626 953 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 KIF2AO00139 706 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 HOXC11O43248 304 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TBL1XO60907 577 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CYP17A1P05093 508 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GLULP15104 373 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 KDELR1P24390 212 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 IL1R2P27930 398 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 EPHB2P29323 1055 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SLC6A4P31645 630 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SERPINB6P35237 376 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DEKP35659 375 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 HCAR3P49019 387 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PTPN5P54829 565 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 COPS2P61201 443 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GNG11P61952 73 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FOXK2Q01167 660 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CDH18Q13634 790 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 E2F5Q15329 346 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 C5orf22Q49AR2 442 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 LY6G5CQ5SRR4 150 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 C6orf118Q5T5N4 469 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SEL1L2Q5TEA6 688 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MEI1Q5TIA1 1274 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TRIM68Q6AZZ1 485 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RFWD3Q6PCD5 774 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RCOR2Q8IZ40 523 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CD101Q93033 1021 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 HES6Q96HZ4 224 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 KCTD15Q96SI1 283 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RPP25Q9BUL9 199 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SLC2A11Q9BYW1 496 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 LINC00597Q9H2U6 94 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PCDH18Q9HCL0 1135 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GPATCH2LQ9NWQ4 482 aa11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 XPO7Q9UIA9 1087 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-210ENST00000578733 IGLV3-10A0A075B6K4 115 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DRGXA6NNA5 263 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 USP27XA6NNY8 438 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MAN2B1O00754 1011 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TRDMT1O14717 391 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 LRIG2O94898 1065 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 LUC7L3O95232 432 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PENKP01210 267 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TYRP14679 529 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ARSAP15289 507 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TCF4P15884 667 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZFXP17010 805 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RHOQP17081 205 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ETFBP38117 255 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GGCXP38435 758 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 EIF2DP41214 584 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MAPKAPK2P49137 400 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 VCPP55072 806 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SEMA3BQ13214 749 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZNF177Q13360 481 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TFDP2Q14188 446 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FYB2Q5VWT5 728 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RHBDF2Q6PJF5 856 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RFX8Q6ZV50 586 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZSCAN30Q86W11 494 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MFN1Q8IWA4 741 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PYROXD2Q8N2H3 581 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SLC35F6Q8N357 371 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CARNMT1Q8N4J0 409 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FAM71BQ8TC56 605 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ASIC4Q96FT7 647 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 HPS4Q9NQG7 708 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ANLNQ9NQW6 1124 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TMPRSS4Q9NRS4 437 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GTSE1Q9NYZ3 720 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FBXL21Q9UKT6 434 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TRIOO75962 3097 aa11.61□□□□□ -0.55
CDK5RAP3-210ENST00000578733 NYNRINQ9P2P1 1898 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms