RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 NOX5Q96PH1 765 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 MIR1-1HGQ9H1L0 117 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 ASNSD1Q9NWL6 643 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 KIAA1522Q9P206 1035 aaPredicted RBP16.44■□□□□ 0.22
CRLF3-203ENST00000578692 PCDH15Q96QU1 1955 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 MUC22E2RYF6 1773 aaPredicted RBP16.43■□□□□ 0.22
CRLF3-203ENST00000578692 KCNU1A8MYU2 1149 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 MOCS3O95396 460 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 DNTTP04053 509 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 SLC2A3P11169 496 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 ACSL1P33121 698 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 CSKP41240 450 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 SNX16P57768 344 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 HSP90AA4PQ58FG1 418 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 MIIPQ5JXC2 388 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 OR6B2Q6IFH4 312 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 MMS22LQ6ZRQ5 1243 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 C11orf57Q6ZUT1 292 aaPredicted RBP16.43■□□□□ 0.22
CRLF3-203ENST00000578692 PIP4P1Q86T03 277 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 SLC47A2Q86VL8 602 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 CHSY1Q86X52 802 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 RNF34Q969K3 372 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 MYO19Q96H55 970 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 SLC2A13Q96QE2 648 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 PCED1AQ9H1Q7 454 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 MTG2Q9H4K7 406 aa16.43■□□□□ 0.22
CRLF3-203ENST00000578692 DNAAF2Q9NVR5 837 aaKnown RBP16.43■□□□□ 0.22
CRLF3-203ENST00000578692 EIF2B4Q9UI10 523 aaKnown RBP16.43■□□□□ 0.22
CRLF3-203ENST00000578692 ASCC3Q8N3C0 2202 aaKnown RBP16.43■□□□□ 0.22
CRLF3-203ENST00000578692 SYNJ2BP-COX16A0A087WUM0 186 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 F5H5T6 163 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 HSF2BPO75031 334 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 GRAP2O75791 330 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 ABCB4P21439 1286 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 CCR1P32246 355 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 BPIFB4P59827 614 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 KCNMA1Q12791 1236 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 FOXC1Q12948 553 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 PITRM1Q5JRX3 1037 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 DPY19L2P1Q6NXN4 242 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 FAM183BPQ6ZVS7 135 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 FAM71AQ8IYT1 594 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 ZCCHC9Q8N567 271 aaKnown RBP16.42■□□□□ 0.22
CRLF3-203ENST00000578692 KDM1BQ8NB78 822 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 C1orf131Q8NDD1 294 aaKnown RBP16.42■□□□□ 0.22
CRLF3-203ENST00000578692 MRGPRX3Q96LB0 322 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 ZDHHC5Q9C0B5 715 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 BTBD1Q9H0C5 482 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 FAM204AQ9H8W3 233 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 DDIT4Q9NX09 232 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 COX16Q9P0S2 106 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 ERVW-1Q9UQF0 538 aa16.42■□□□□ 0.22
CRLF3-203ENST00000578692 BCAT2O15382 392 aaPredicted RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 ERBB2P04626 1255 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 SRPRAP08240 638 aaKnown RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 PNMA6AP0CW24 399 aaPredicted RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 CD59P13987 128 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 SLC6A3Q01959 620 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 SLC14A1Q13336 389 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 HNRNPA1L2Q32P51 320 aaKnown RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 CT47A1Q5JQC4 288 aaPredicted RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 ZNF776Q68DI1 518 aaPredicted RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 APCDD1Q8J025 514 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 PRMT1Q99873 361 aaKnown RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 RSPH9Q9H1X1 276 aaPredicted RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 C6orf106Q9H6K1 298 aaPredicted RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 PLCB1Q9NQ66 1216 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 SAMSN1Q9NSI8 373 aaKnown RBP16.41■□□□□ 0.22
CRLF3-203ENST00000578692 NCKAP1Q9Y2A7 1128 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 CEP83Q9Y592 693 aa16.41■□□□□ 0.22
CRLF3-203ENST00000578692 PES1O00541 588 aaKnown RBP16.4■□□□□ 0.22
CRLF3-203ENST00000578692 RNASEH1O60930 286 aaKnown RBP16.4■□□□□ 0.22
CRLF3-203ENST00000578692 SIN3BO75182 1162 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 GJB3O75712 270 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 NOS2P35228 1153 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 CTSOP43234 321 aaPredicted RBP16.4■□□□□ 0.22
CRLF3-203ENST00000578692 ECT2LQ008S8 904 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 GRIK2Q13002 908 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 SLC12A1Q13621 1099 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 RAPGEF1Q13905 1077 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 KCNJ12Q14500 433 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 ARID5BQ14865 1188 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 DRAP1Q14919 205 aaPredicted RBP16.4■□□□□ 0.22
CRLF3-203ENST00000578692 TTC31Q49AM3 519 aaPredicted RBP16.4■□□□□ 0.22
CRLF3-203ENST00000578692 PTPN20Q4JDL3 420 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 KLHDC7AQ5VTJ3 777 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 OLFML1Q6UWY5 402 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 DHX40Q8IX18 779 aaKnown RBP16.4■□□□□ 0.22
CRLF3-203ENST00000578692 C1orf216Q8TAB5 229 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 PDCL3Q9H2J4 239 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 SYNCQ9H7C4 482 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 SGK2Q9HBY8 427 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 SCML1Q9UN30 329 aa16.4■□□□□ 0.22
CRLF3-203ENST00000578692 TARSL2A2RTX5 802 aaKnown RBP16.39■□□□□ 0.21
CRLF3-203ENST00000578692 TTC34A8MYJ7 566 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 SEMA4FO95754 770 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 NME3Q13232 169 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms