RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 ZFXP17010 805 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 HOXB4P17483 251 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CD52P31358 61 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 STX2P32856 288 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PHBP35232 272 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 RPA3P35244 121 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 GRIA1P42261 906 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 NR2C2P49116 596 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FLT3LGP49771 235 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SCNN1GP51170 649 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TKTL1P51854 596 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 MAP3K7CLP57077 242 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 DAOAP59103 153 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CACNB2Q08289 660 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 MGAT5Q09328 741 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SEMA3BQ13214 749 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SEMA5AQ13591 1074 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 DPYSQ14117 519 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TRIM71Q2Q1W2 868 aaKnown RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 KLHL38Q2WGJ6 581 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 GALNTL6Q49A17 601 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TIGD5Q53EQ6 642 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 DCAF6Q58WW2 860 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 RNF187Q5TA31 235 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FAM72AQ5TYM5 149 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FAM72DQ6L9T8 149 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PPP1R21Q6ZMI0 780 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 RGS9BPQ6ZS82 235 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 ARHGEF18Q6ZSZ5 1173 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CCDC121Q6ZUS5 278 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CTU1Q7Z7A3 348 aaKnown RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FAM35AQ86V20 835 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FAM72BQ86X60 149 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PSTKQ8IV42 348 aaKnown RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CDKL3Q8IVW4 592 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TP53INP2Q8IXH6 220 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PALM2Q8IXS6 379 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 MICALL1Q8N3F8 863 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CCDC33Q8N5R6 958 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 BANPQ8N9N5 519 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 NETO2Q8NC67 525 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 MCUQ8NE86 351 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 RHBDD1Q8TEB9 315 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SLC44A1Q8WWI5 657 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PPM1EQ8WY54 764 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PCED1BQ96HM7 432 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SERAC1Q96JX3 654 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 KCNK16Q96T55 309 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PKMYT1Q99640 499 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SYT15Q9BQS2 421 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TRIM56Q9BRZ2 755 aaKnown RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 ULBP1Q9BZM6 244 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 WDR6Q9NNW5 1121 aaKnown RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SMYD2Q9NRG4 433 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PIGVQ9NUD9 493 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 ABCF3Q9NUQ8 709 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SLC38A7Q9NVC3 462 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 DDX43Q9NXZ2 648 aaKnown RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 NKIRAS1Q9NYS0 192 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SENP1Q9P0U3 644 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 RCOR3Q9P2K3 495 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PADI3Q9ULW8 664 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SMG5Q9UPR3 1016 aaKnown RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 GIT1Q9Y2X7 761 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 USP15Q9Y4E8 981 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SCN10AQ9Y5Y9 1956 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 KAT6AQ92794 2004 aa5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 COL4A4P53420 1690 aaPredicted RBP5.46□□□□□ -1.54
ERVFRD-3-201ENST00000578561 GOLGA6L7A0A1B0GV03 622 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CASTOR2A6NHX0 329 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 A6NJY4 79 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TMEM88BA6NKF7 163 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 M0QYT0 321 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 DCLK1O15075 740 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 MFSD11O43934 449 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 RASSF9O75901 435 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 ASGR1P07306 291 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FAM200BP0CF97 657 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 DHRS4L1P0CG22 281 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 KRT15P19012 456 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 KRT4P19013 534 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TPSB2P20231 275 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PRKCHP24723 683 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 CCND3P30281 292 aaPredicted RBP5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 RDXP35241 583 aaKnown RBP5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 ADRA1BP35368 520 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 MSH2P43246 934 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 ETV4P43268 484 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 LHX1P48742 406 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 NEK3P51956 506 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PRKCZQ05513 592 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 SLC18A2Q05940 514 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 FAAP100Q0VG06 881 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 WASHC5Q12768 1159 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 LPIN1Q14693 890 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PAFAH1B3Q15102 231 aaKnown RBP5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 PRKD1Q15139 912 aaPredicted RBP5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 MTFR1Q15390 333 aa5.45□□□□□ -1.54
ERVFRD-3-201ENST00000578561 TPSAB1Q15661 275 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms