RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TATDN2Q93075 761 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 DDX50Q9BQ39 737 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 NRSN2Q9GZP1 204 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 CNGB3Q9NQW8 809 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 MAPK8IP1Q9UQF2 711 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 FLNBO75369 2602 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 NYNRINQ9P2P1 1898 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 A0A1W2PP55 124 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 MID1O15344 667 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 SIN3BO75182 1162 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 CD19P15391 556 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 PFKFB1P16118 471 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 ITPKBP27987 946 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 CSKP41240 450 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 ACADVLP49748 655 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 TARDBPQ13148 414 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 DNAJC3Q13217 504 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 ILKQ13418 452 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 CDH18Q13634 790 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 PRAMEF14Q5SWL7 426 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 HES3Q5TGS1 186 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 MSANTD2Q6P1R3 559 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 RFWD3Q6PCD5 774 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 DHX40Q8IX18 779 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 SCML4Q8N228 414 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 EID2Q8N6I1 236 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 FIBINQ8TAL6 211 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 WFDC5Q8TCV5 224 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 TTC17Q96AE7 1141 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 FCRL3Q96P31 734 aaPredicted RBP12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 MTG2Q9H4K7 406 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 PRORYQ9H606 182 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 STIM2Q9P246 746 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 SERGEFQ9UGK8 458 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 ADAMTS1Q9UHI8 967 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
CTDNEP1-212ENST00000576613 A0A1B0GVL5 298 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 TARSL2A2RTX5 802 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 CBX4O00257 560 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 CAPN9O14815 690 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 ACSL4O60488 711 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 MOCS3O95396 460 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 ZIC2O95409 532 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 ADH1BP00325 375 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 IGLV3-27P01718 113 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 PRB1P04280 392 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 WNT1P04628 370 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 LCP1P13796 627 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 CMA1P23946 247 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 SLC8A1P32418 973 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 CCR5P51681 352 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBX4P57082 545 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 DAOAP59103 153 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 CUL2Q13617 745 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 RTP5Q14D33 572 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 EDRF1Q3B7T1 1238 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 FAM133BQ5BKY9 247 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 RNF219Q5W0B1 726 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 FBXL19Q6PCT2 694 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 SND1Q7KZF4 910 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 SNIP1Q8TAD8 396 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 IRGQQ8WZA9 623 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 AZIN2Q96A70 460 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 MYO19Q96H55 970 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 SERAC1Q96JX3 654 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 ERVMER34-1Q9H9K5 563 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 KIAA1257Q9ULG3 409 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 CEP83Q9Y592 693 aa12.08□□□□□ -0.48
CTDNEP1-212ENST00000576613 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 EDDM13A0A1B0GTR0 161 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 GOLGA6L7A0A1B0GV03 622 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 TLR4O00206 839 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 TLX3O43711 291 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 VDRP11473 427 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 GOT1P17174 413 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 C5AR1P21730 350 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 SLC6A4P31645 630 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 SYKP43405 635 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 PSMD8P48556 350 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 ADPRHP54922 357 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 CLDN6P56747 220 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 MCCD1P59942 119 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 KCNJ12Q14500 433 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 SHBQ15464 509 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 ZCWPW2Q504Y3 356 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 C9orf64Q5T6V5 341 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 TCERG1LQ5VWI1 586 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 CARNMT1Q8N4J0 409 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 OR14C36Q8NHC7 312 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 UBA3Q8TBC4 463 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms