RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GZMAP12544 262 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CCR1P32246 355 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 TIE1P35590 1138 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 GJC1P36383 396 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CTSOP43234 321 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-215ENST00000576033 PTPN9P43378 593 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 SLC11A2P49281 568 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 VAV2P52735 878 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF143P52747 638 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-215ENST00000576033 GAD2Q05329 585 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 TCF15Q12870 199 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 LMAN2Q12907 356 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 NNTQ13423 1086 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 SMTNL2Q2TAL5 461 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 FUT11Q495W5 492 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 C2orf27AQ580R0 203 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 FAM182AQ5T1J6 154 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 C10orf76Q5T2E6 689 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 ADGRF1Q5T601 910 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 SMYD5Q6GMV2 418 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 GRAMD4Q6IC98 578 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 FBXL22Q6P050 247 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 SCYL2Q6P3W7 929 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 DCUN1D2Q6PH85 259 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 BMP8AQ7Z5Y6 402 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 TFAP2DQ7Z6R9 452 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CACUL1Q86Y37 369 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CPXM2Q8N436 756 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CCDC33Q8N5R6 958 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 ALLCQ8N6M5 410 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 TERB1Q8NA31 727 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 DTWD2Q8NBA8 298 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CENPIQ92674 756 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-215ENST00000576033 PGAP3Q96FM1 320 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-215ENST00000576033 LMLNQ96KR4 655 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 BTN2A3PQ96KV6 586 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 HHIPQ96QV1 700 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 C1QTNF1Q9BXJ1 281 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 DCLK3Q9C098 648 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 MTG2Q9H4K7 406 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 WDCPQ9H6R7 721 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 WDR35Q9P2L0 1181 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 PCSK1NQ9UHG2 260 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 SALL4Q9UJQ4 1053 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 ANAPC7Q9UJX3 599 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 INTS6Q9UL03 887 aaKnown RBP8.17□□□□□ -1.1
CCDC40-215ENST00000576033 ACTL7AQ9Y615 435 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 RAD54BQ9Y620 910 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CKAP5Q14008 2032 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 E9PAM4 449 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 F5H5T6 163 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 H0Y858 1186 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 SGK1O00141 431 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 MAN2B1O00754 1011 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 SRGAP2O75044 1071 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 HLA-EP13747 358 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 GLDCP23378 1020 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 MZF1P28698 734 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 MIPP30301 263 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 GBP1P32455 592 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CSKP41240 450 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 KIR2DL1P43626 348 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 DGKGP49619 791 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 STK19P49842 368 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 TAS2R40P59535 323 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 GNG11P61952 73 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 SRSF5Q13243 272 aaKnown RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 PPP2R5DQ14738 602 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 KCNT1Q5JUK3 1230 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 MANEALQ5VSG8 457 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CXorf57Q6NSI4 855 aaKnown RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 MFN1Q8IWA4 741 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 UNC45BQ8IWX7 931 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 APCDD1Q8J025 514 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 ATP6V0D2Q8N8Y2 350 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF564Q8TBZ8 553 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CHD5Q8TDI0 1954 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CLDN23Q96B33 292 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 OTUB2Q96DC9 234 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 SHDQ96IW2 340 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CCDC42Q96M95 316 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 RPRD1AQ96P16 312 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 PNKPQ96T60 521 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CNPY3Q9BT09 278 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 SNRNP25Q9BV90 132 aaKnown RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 TRIM62Q9BVG3 475 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 LACRTQ9GZZ8 138 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CHRDQ9H2X0 955 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 ZWILCHQ9H900 591 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 PARVAQ9NVD7 372 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 SPATA6Q9NWH7 488 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 CACNA2D2Q9NY47 1150 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 DNAI1Q9UI46 699 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF510Q9Y2H8 683 aa8.16□□□□□ -1.1
CCDC40-215ENST00000576033 BZW2Q9Y6E2 419 aaKnown RBP8.16□□□□□ -1.1
CCDC40-215ENST00000576033 DUSP10Q9Y6W6 482 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms