RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 NFIL3Q16649 462 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 HNRNPA1L2Q32P51 320 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 C9orf64Q5T6V5 341 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 BSPRYQ5W0U4 402 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 RESP18Q5W5W9 173 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 INTS8Q75QN2 995 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 KDM1BQ8NB78 822 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 FIBINQ8TAL6 211 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 GANCQ8TET4 914 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 SEMA4DQ92854 862 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 PAGE5Q96GU1 130 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 MRGPRX3Q96LB0 322 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 GDF3Q9NR23 364 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 ABCC13Q9NSE7 274 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 EXOC1Q9NV70 894 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 INTS6Q9UL03 887 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 FZD4Q9ULV1 537 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 PCDHA7Q9UN72 937 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 GOLGA6L7A0A1B0GV03 622 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 A0A1W2PP55 124 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 ACTN4O43707 911 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 CALUO43852 315 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 RNASEH1O60930 286 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 CKMT2P17540 419 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 SLC6A4P31645 630 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 SLC8A1P32418 973 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 GTF2H1P32780 548 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 ARRB1P49407 418 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 SLC8A3P57103 927 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 INSM1Q01101 510 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 CFHR1Q03591 330 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 FAM133BQ5BKY9 247 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 RFWD3Q6PCD5 774 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 ERICH1Q86X53 443 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 SPACA3Q8IXA5 215 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 CEP57L1Q8IYX8 460 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 SCML4Q8N228 414 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 AADATQ8N5Z0 425 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 DCBLD1Q8N8Z6 715 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 ZNF557Q8N988 423 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 CCDC150Q8NCX0 1101 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 RNF139Q8WU17 664 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 EDEM1Q92611 657 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 AZIN2Q96A70 460 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 FAM129BQ96TA1 746 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 TMEM8AQ9HCN3 771 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 AASDHPPTQ9NRN7 309 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 ARHGAP20Q9P2F6 1191 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 TPX2Q9ULW0 747 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 PLXNA2O75051 1894 aa10.36□□□□□ -0.75
CALCOCO2-227ENST00000575560 ARID1BQ8NFD5 2236 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 TARSL2A2RTX5 802 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 CAPN8A6NHC0 703 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 IRAK2O43187 625 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 MSI1O43347 362 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 LATO43561 262 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 ACSL4O60488 711 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 TBL1XO60907 577 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 RNASEH2AO75792 299 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 ASLP04424 464 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 GOT1P17174 413 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 GLDCP23378 1020 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 NR2F2P24468 414 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 ACP1P24666 158 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 ACTN2P35609 894 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 PSMC2P35998 433 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 CSKP41240 450 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 ADPRHP54922 357 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 ST8SIA6P61647 398 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 ADIGQ0VDE8 80 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 PROX2Q3B8N5 592 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 TBC1D25Q3MII6 688 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 KRT39Q6A163 491 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 MSANTD2Q6P1R3 559 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 SPATS2Q86XZ4 545 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 MMAAQ8IVH4 418 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 UNC45BQ8IWX7 931 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 DHX40Q8IX18 779 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 FAM186BQ8IYM0 893 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 OXR1Q8N573 874 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 MFSD2AQ8NA29 543 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 KCTD13Q8WZ19 329 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 TATDN2Q93075 761 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 FAM131CQ96AQ9 280 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 WBP1Q96G27 269 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 SERAC1Q96JX3 654 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 IPO9Q96P70 1041 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 OMDQ99983 421 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 LRRC4Q9HBW1 653 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 RAB20Q9NX57 234 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 TSPAN16Q9UKR8 245 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 CLCA2Q9UQC9 943 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 MYLKQ15746 1914 aa10.35□□□□□ -0.75
CALCOCO2-227ENST00000575560 CYSRT1A8MQ03 144 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 TTC34A8MYJ7 566 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 J3QKU1 62 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 ERVH48-1M5A8F1 160 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 GABBR2O75899 941 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms