RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TBC1D22BQ9NU19 505 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 AURKCQ9UQB9 309 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 ZBBXA8MT70 800 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 DENRO43583 198 aaKnown RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A9O60656 530 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ITGAVP06756 1048 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A6P19224 532 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A1P22309 533 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A4P22310 534 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ME2P23368 584 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A3P35503 534 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A5P35504 534 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 GJA5P36382 358 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 NPTX2P47972 431 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 BCAP31P51572 246 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 TRIM72Q6ZMU5 477 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UNC45BQ8IWX7 931 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ZNF516Q92618 1163 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 KCNN1Q92952 543 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 PLEKHA8Q96JA3 519 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 NACA2Q9H009 215 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A7Q9HAW7 530 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A10Q9HAW8 530 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UGT1A8Q9HAW9 530 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 SF3B1O75533 1304 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 NFASCO94856 1347 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 A0A087WXM4 84 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 GOLGA8TH3BQL2 631 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 FAM189A1O60320 539 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 GRIN3BO60391 1043 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 H6PDO95479 791 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ATP5BP06576 529 aaKnown RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 RALBP11234 206 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 S100A1P23297 94 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ETV4P43268 484 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 LIG4P49917 911 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 CYP2R1Q6VVX0 501 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 RNF111Q6ZNA4 994 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 SLC7A5P1Q8MH63 180 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 PHTF2Q8N3S3 785 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 FAM156AQ8NDB6 213 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 HPS1Q92902 700 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 GPRASP2Q96D09 838 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 HEPHQ9BQS7 1158 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 UPF3AQ9H1J1 476 aaKnown RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ZNF229Q9UJW7 825 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 MAGED2Q9UNF1 606 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 MAFBQ9Y5Q3 323 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 CEPT1Q9Y6K0 416 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 EVPLQ92817 2033 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 hCG_1818297A0A087WSY0 165 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 SAC3D1A6NKF1 404 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 SDR42E2A6NKP2 422 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ARIH2O95376 493 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 CALB1P05937 261 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 KRT7P08729 469 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 EMP3P54852 163 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 BNIP3Q12983 259 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 PRKG1Q13976 671 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 OGFRL1Q5TC84 451 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ARHGEF16Q5VV41 709 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 LRRC8EQ6NSJ5 796 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 LAYNQ6UX15 382 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 MAP4K3Q8IVH8 894 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 HELQQ8TDG4 1101 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 LENG8Q96PV6 779 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-212ENST00000574799 PKP2Q99959 881 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 ZNF696Q9H7X3 374 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 INIPQ9NRY2 104 aa9.81□□□□□ -0.84
CCDC40-212ENST00000574799 SERPINE1P05121 402 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 COL6A2P12110 1019 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 ZNF12P17014 697 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 XRCC1P18887 633 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-212ENST00000574799 RPL26P61254 145 aaKnown RBP9.8□□□□□ -0.84
CCDC40-212ENST00000574799 CDO1Q16878 200 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 Q6ZNX1 250 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 C15orf39Q6ZRI6 1047 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 TMEM35BQ8NCS4 154 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 SCYL1Q96KG9 808 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 CIB1Q99828 191 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 SLC4A5Q9BY07 1137 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 POLR1BQ9H9Y6 1135 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 TCF7L2Q9NQB0 619 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 PNPLA3Q9NST1 481 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 EBF1Q9UH73 591 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 CDY2AQ9Y6F7 541 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 CDY1Q9Y6F8 540 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 A0A0G2JLL6 359 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-212ENST00000574799 A0A1B0GTW7 788 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 C19orf81C9J6K1 198 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 KLF11O14901 512 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 OXSR1O95747 527 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-212ENST00000574799 ZNF23P17027 643 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 PHKA2P46019 1235 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 SLC18A2Q05940 514 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 KLF10Q13118 480 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 DPYSL3Q14195 570 aa9.8□□□□□ -0.84
CCDC40-212ENST00000574799 PTK2BQ14289 1009 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms