RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SERPINB11Q96P15 392 aa15.78■□□□□ 0.12
CTNS-209ENST00000574776 INTS2Q9H0H0 1204 aaKnown RBP15.78■□□□□ 0.12
CTNS-209ENST00000574776 NUCKS1Q9H1E3 243 aaKnown RBP15.78■□□□□ 0.12
CTNS-209ENST00000574776 SGK2Q9HBY8 427 aa15.78■□□□□ 0.12
CTNS-209ENST00000574776 UBE2TQ9NPD8 197 aaPredicted RBP15.78■□□□□ 0.12
CTNS-209ENST00000574776 CNTN6Q9UQ52 1028 aa15.78■□□□□ 0.12
CTNS-209ENST00000574776 APOBEC2Q9Y235 224 aaKnown RBP15.78■□□□□ 0.12
CTNS-209ENST00000574776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.78■□□□□ 0.12
CTNS-209ENST00000574776 SNX11Q9Y5W9 270 aa15.78■□□□□ 0.12
CTNS-209ENST00000574776 CACNA1GO43497 2377 aa15.78■□□□□ 0.12
CTNS-209ENST00000574776 MUC22E2RYF6 1773 aaPredicted RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 TYW5A2RUC4 315 aaKnown RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 CAPN9O14815 690 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 SIN3BO75182 1162 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 GADD45BO75293 160 aaPredicted RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 LETM1O95202 739 aaPredicted RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 AFPP02771 609 aaKnown RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 ACADSBP45954 432 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 TTC31Q49AM3 519 aaPredicted RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 DCAF6Q58WW2 860 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 FOXR2Q6PJQ5 311 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 DBX2Q6ZNG2 339 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 TAC4Q86UU9 113 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 CCDC117Q8IWD4 279 aaPredicted RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 DHX40Q8IX18 779 aaKnown RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 RHBDD1Q8TEB9 315 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 ZNF606Q8WXB4 792 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 MRGPRX3Q96LB0 322 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 SLC4A5Q9BY07 1137 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 RSPH9Q9H1X1 276 aaPredicted RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 TM9SF3Q9HD45 589 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 ACP6Q9NPH0 428 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 CYTH4Q9UIA0 394 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 XPO7Q9UIA9 1087 aaKnown RBP15.77■□□□□ 0.12
CTNS-209ENST00000574776 NCKAP1Q9Y2A7 1128 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 ANKRD6Q9Y2G4 727 aa15.77■□□□□ 0.12
CTNS-209ENST00000574776 PKD1L2Q7Z442 2459 aa15.77■□□□□ 0.11
CTNS-209ENST00000574776 DMXL2Q8TDJ6 3036 aa15.77■□□□□ 0.11
CTNS-209ENST00000574776 WDFY3Q8IZQ1 3526 aa15.77■□□□□ 0.11
CTNS-209ENST00000574776 ZFYVE26Q68DK2 2539 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 SPEGQ15772 3267 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 FAM47DPA6NHR8 397 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 TAF4O00268 1085 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 PAPSS1O43252 624 aaPredicted RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 SART1O43290 800 aaKnown RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 ASLP04424 464 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 CD27P26842 260 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 CTSOP43234 321 aaPredicted RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 MARSP56192 900 aaKnown RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 NNTQ13423 1086 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 CDH18Q13634 790 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 SUZ12Q15022 739 aaKnown RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 TEAD4Q15561 434 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 HNRNPA1L2Q32P51 320 aaKnown RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 ZC3H12AQ5D1E8 599 aaKnown RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 PITRM1Q5JRX3 1037 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 LAYNQ6UX15 382 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 GLRX5Q86SX6 157 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 LGI2Q8N0V4 545 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 STK32AQ8WU08 396 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 PABPC3Q9H361 631 aaKnown RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 OSGEPQ9NPF4 335 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 FBXL12Q9NXK8 326 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 KIAA1522Q9P206 1035 aaPredicted RBP15.76■□□□□ 0.11
CTNS-209ENST00000574776 ERVW-1Q9UQF0 538 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 PCDHGB2Q9Y5G2 931 aa15.76■□□□□ 0.11
CTNS-209ENST00000574776 TTC34A8MYJ7 566 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 E5RJQ4 531 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 THAP12O43422 761 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 MED7O43513 233 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 RNASEH1O60930 286 aaKnown RBP15.75■□□□□ 0.11
CTNS-209ENST00000574776 LUC7L3O95232 432 aaKnown RBP15.75■□□□□ 0.11
CTNS-209ENST00000574776 CAPNS1P04632 268 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 ATXN1LP0C7T5 689 aaKnown RBP15.75■□□□□ 0.11
CTNS-209ENST00000574776 YWHAZP63104 245 aaKnown RBP15.75■□□□□ 0.11
CTNS-209ENST00000574776 SCAPQ12770 1279 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 PAK1Q13153 545 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 TAF5Q15542 800 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 KCNT1Q5JUK3 1230 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 C9orf64Q5T6V5 341 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 RAP1GAP2Q684P5 730 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 GJB7Q6PEY0 223 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 CCNI2Q6ZMN8 369 aaPredicted RBP15.75■□□□□ 0.11
CTNS-209ENST00000574776 USP30Q70CQ3 517 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 BEND5Q7L4P6 421 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 TMEM110Q86TL2 294 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 CREBRFQ8IUR6 639 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 MMAAQ8IVH4 418 aaKnown RBP15.75■□□□□ 0.11
CTNS-209ENST00000574776 APCDD1Q8J025 514 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 ORAI3Q9BRQ5 295 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 CRACR2AQ9BSW2 395 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 NEUROG2Q9H2A3 272 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 SERGEFQ9UGK8 458 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 SLCO3A1Q9UIG8 710 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 BTBD3Q9Y2F9 522 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 CEP83Q9Y592 693 aa15.75■□□□□ 0.11
CTNS-209ENST00000574776 PLXNB3Q9ULL4 1909 aa15.74■□□□□ 0.11
CTNS-209ENST00000574776 DSPP15924 2871 aaKnown RBP15.74■□□□□ 0.11
CTNS-209ENST00000574776 GOLGA8CPA6NN73 597 aa15.74■□□□□ 0.11
CTNS-209ENST00000574776 MID1O15344 667 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms