RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 WDR41Q9HAD4 459 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 DCDC2Q9UHG0 476 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 UBIAD1Q9Y5Z9 338 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 ATE1O95260 518 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 HMGCRP04035 888 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 GLDCP23378 1020 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CD151P48509 253 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 IKBKEQ14164 716 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CDO1Q16878 200 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 DCAF6Q58WW2 860 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 TMEM198Q66K66 360 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 DCDC5Q6ZRR9 648 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 PLD5Q8N7P1 536 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 TDRD5Q8NAT2 981 aaKnown RBP14.76□□□□□ -0.05
SMG6-215ENST00000574501 THAP11Q96EK4 314 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 ATXN7L3BQ96GX2 97 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 MSTO1Q9BUK6 570 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 ZNF518BQ9C0D4 1074 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 MAF1Q9H063 256 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 BRD8Q9H0E9 1235 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 POLR3FQ9H1D9 316 aaPredicted RBP14.76□□□□□ -0.05
SMG6-215ENST00000574501 CYP26B1Q9NR63 512 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 GPATCH2LQ9NWQ4 482 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 GABBR1Q9UBS5 961 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CCNL1Q9UK58 526 aaPredicted RBP14.76□□□□□ -0.05
SMG6-215ENST00000574501 CCPG1Q9ULG6 757 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CDY1Q9Y6F8 540 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 SQORQ9Y6N5 450 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 THSD7AQ9UPZ6 1657 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 K7EPI3 171 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 BCAS2O75934 225 aaPredicted RBP14.76□□□□□ -0.05
SMG6-215ENST00000574501 ZBTB11O95625 1053 aaPredicted RBP14.76□□□□□ -0.05
SMG6-215ENST00000574501 CAPNS1P04632 268 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 GJA8P48165 433 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CMC1Q7Z7K0 106 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 PQLC3Q8N755 202 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CHURC1Q8WUH1 139 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 MASTLQ96GX5 879 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 ZNF597Q96LX8 424 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CGRRF1Q99675 332 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 CIB1Q99828 191 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 FRMD8Q9BZ67 464 aaPredicted RBP14.76□□□□□ -0.05
SMG6-215ENST00000574501 TRPV6Q9H1D0 765 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 MOCS1Q9NZB8 636 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 BCAP29Q9UHQ4 241 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 NR2E3Q9Y5X4 410 aa14.76□□□□□ -0.05
SMG6-215ENST00000574501 MATN2O00339 956 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 ERBB2P04626 1255 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 ALDH2P05091 517 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 TYK2P29597 1187 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 POLR2BP30876 1174 aaKnown RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 HSD17B4P51659 736 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 ENPEPQ07075 957 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 ART3Q13508 389 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 KRT27Q7Z3Y8 459 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 CENPSQ8N2Z9 138 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 FIBCD1Q8N539 461 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 LRRC39Q96DD0 335 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 NPAS2Q99743 824 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 TARS2Q9BW92 718 aaKnown RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 PCDHAC1Q9H158 963 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 DBNDD1Q9H9R9 158 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 TRNAU1APQ9NX07 287 aaKnown RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 PCDHB12Q9Y5F1 795 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 SNX13Q9Y5W8 968 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 TESPA1A2RU30 521 aaPredicted RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 ACOT8O14734 319 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 HMOX2P30519 316 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 CCR10P46092 362 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 BCAP31P51572 246 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 C21orf59P57076 290 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 CD300CQ08708 224 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 C15orf59Q2T9L4 293 aaPredicted RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 LSM12Q3MHD2 195 aaKnown RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 MTX3Q5HYI7 312 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 NANOGP8Q6NSW7 305 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 XYLT1Q86Y38 959 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 PLD6Q8N2A8 252 aaKnown RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 FAM47BQ8NA70 645 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 DLG3Q92796 817 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 PLEKHA8Q96JA3 519 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 HNRNPABQ99729 332 aaKnown RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 NEURL2Q9BR09 285 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 OSBPL11Q9BXB4 747 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 MTMR12Q9C0I1 747 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 CLK4Q9HAZ1 481 aaKnown RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 PNPLA3Q9NST1 481 aa14.75□□□□□ -0.05
SMG6-215ENST00000574501 C20orf96Q9NUD7 363 aaPredicted RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 SEPT9Q9UHD8 586 aaPredicted RBP14.75□□□□□ -0.05
SMG6-215ENST00000574501 ASS1P00966 412 aaKnown RBP14.74□□□□□ -0.05
SMG6-215ENST00000574501 CD247P20963 164 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 CNTFP26441 200 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 CDH5P33151 784 aaPredicted RBP14.74□□□□□ -0.05
SMG6-215ENST00000574501 MAGEA3P43357 314 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 BCAR1P56945 870 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 CNTN2Q02246 1040 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 ZNF362Q5T0B9 420 aaPredicted RBP14.74□□□□□ -0.05
SMG6-215ENST00000574501 C16orf87Q6PH81 154 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms