RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 TMEM110Q86TL2 294 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 NAXDQ8IW45 347 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 GANCQ8TET4 914 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 TTC17Q96AE7 1141 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 THAP9Q9H5L6 903 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 TJP2Q9UDY2 1190 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 CEP83Q9Y592 693 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 PCDHB9Q9Y5E1 797 aa21.89■■□□□ 1.09
CHRNB1-206ENST00000574054 BECN2A8MW95 431 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 H0Y626 953 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 LUC7L3O95232 432 aaKnown RBP21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 SEMA4FO95754 770 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 TRUB2O95900 331 aaKnown RBP21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 ASLP04424 464 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 RDXP35241 583 aaKnown RBP21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 ZBTB16Q05516 673 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 HNRNPDQ14103 355 aaKnown RBP21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 TPD52L1Q16890 204 aaPredicted RBP21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 EXOC3L4Q17RC7 722 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 FSCBQ5H9T9 825 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 PASD1Q8IV76 773 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 BTBD1Q9H0C5 482 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 FAM204AQ9H8W3 233 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 APEX2Q9UBZ4 518 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 INTS6Q9UL03 887 aaKnown RBP21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 KNL1Q8NG31 2342 aa21.88■■□□□ 1.09
CHRNB1-206ENST00000574054 SYNJ2BP-COX16A0A087WUM0 186 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 A0A1B0GVT2 93 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 FSBPO95073 299 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 MOCS3O95396 460 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 CER1O95813 267 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 TACR2P21452 398 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 CSNK1EP49674 416 aaKnown RBP21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 PITX1P78337 314 aaPredicted RBP21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 TAF5Q15542 800 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 TRIP6Q15654 476 aaKnown RBP21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 PITRM1Q5JRX3 1037 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 DHX40Q8IX18 779 aaKnown RBP21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 BTN2A3PQ96KV6 586 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 GAREM1Q9H706 876 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 IL21RQ9HBE5 538 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 COX16Q9P0S2 106 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 SLC12A6Q9UHW9 1150 aa21.87■■□□□ 1.09
CHRNB1-206ENST00000574054 RNASEH1O60930 286 aaKnown RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 SIN3BO75182 1162 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 MATKP42679 507 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 CTSOP43234 321 aaPredicted RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 AFF3P51826 1226 aaKnown RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 CDK17Q00537 523 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 BNC1Q01954 994 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 HNRNPA1L2Q32P51 320 aaKnown RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 RNF219Q5W0B1 726 aaPredicted RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 IL27RAQ6UWB1 636 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 IRF2BP1Q8IU81 584 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 ATP6V0D2Q8N8Y2 350 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 SHC3Q92529 594 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 RNF34Q969K3 372 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 MYO19Q96H55 970 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 PPP1R13BQ96KQ4 1090 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 CPXM1Q96SM3 734 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 RSPH9Q9H1X1 276 aaPredicted RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 KIAA1522Q9P206 1035 aaPredicted RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 KLK13Q9UKR3 277 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 ERVW-1Q9UQF0 538 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 NCKAP1Q9Y2A7 1128 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 FNDC3AQ9Y2H6 1198 aaKnown RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 SLCO1B1Q9Y6L6 691 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 ASPMQ8IZT6 3477 aa21.86■■□□□ 1.09
CHRNB1-206ENST00000574054 F5H5T6 163 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 TRIM16O95361 564 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 IGLV3-25P01717 112 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 PON1P27169 355 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 ECT2LQ008S8 904 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 ZNF423Q2M1K9 1284 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 HLA-BQ31612 363 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 CIR1Q86X95 450 aaPredicted RBP21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 CHCHD4Q8N4Q1 142 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 MLKLQ8NB16 471 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 C1orf216Q8TAB5 229 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 SETD7Q8WTS6 366 aaKnown RBP21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 BIRC7Q96CA5 298 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 MRGPRX3Q96LB0 322 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 PABPC3Q9H361 631 aaKnown RBP21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 SGK2Q9HBY8 427 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 DDIT4Q9NX09 232 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 NEUROG3Q9Y4Z2 214 aa21.85■■□□□ 1.09
CHRNB1-206ENST00000574054 GTPBP10A4D1E9 387 aaKnown RBP21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 FAM47DPA6NHR8 397 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 TTC34A8MYJ7 566 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 GRAP2O75791 330 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 C7P10643 843 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 NUMBP49757 651 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 PTK2Q05397 1052 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 TEAD4Q15561 434 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 DEFB106AQ8N104 65 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 WDTC1Q8N5D0 677 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 C1orf131Q8NDD1 294 aaKnown RBP21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 GATA6Q92908 595 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 NOX5Q96PH1 765 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms