RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TFE3P19532 575 aaPredicted RBP18.03■□□□□ 0.48
SMG6-214ENST00000573827 KRT9P35527 623 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 KLK7P49862 253 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 CDK17Q00537 523 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 ARID5BQ14865 1188 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 FNDC3BQ53EP0 1204 aaKnown RBP18.03■□□□□ 0.48
SMG6-214ENST00000573827 N4BP2L1Q5TBK1 243 aaPredicted RBP18.03■□□□□ 0.48
SMG6-214ENST00000573827 NOP9Q86U38 636 aaKnown RBP18.03■□□□□ 0.48
SMG6-214ENST00000573827 LGI2Q8N0V4 545 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 ZNF557Q8N988 423 aaPredicted RBP18.03■□□□□ 0.48
SMG6-214ENST00000573827 C1orf216Q8TAB5 229 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 EPS8L1Q8TE68 723 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 STK33Q9BYT3 514 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 MTG2Q9H4K7 406 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 ANLNQ9NQW6 1124 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 SLC6A14Q9UN76 642 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 PLA2G4CQ9UP65 541 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 CHD6Q8TD26 2715 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 C10orf142B7Z368 130 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 ATP5BP06576 529 aaKnown RBP18.02■□□□□ 0.48
SMG6-214ENST00000573827 CTSOP43234 321 aaPredicted RBP18.02■□□□□ 0.48
SMG6-214ENST00000573827 IRAK1P51617 712 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 BPIFB4P59827 614 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 RPS14P62263 151 aaKnown RBP18.02■□□□□ 0.48
SMG6-214ENST00000573827 RAPGEF1Q13905 1077 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 DUOXA1Q1HG43 343 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 PITRM1Q5JRX3 1037 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 OR6B2Q6IFH4 312 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 TRNP1Q6NT89 227 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 FBXL22Q6P050 247 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 APTXQ7Z2E3 356 aaKnown RBP18.02■□□□□ 0.48
SMG6-214ENST00000573827 BNIPLQ7Z465 357 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 CHSY1Q86X52 802 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 CACUL1Q86Y37 369 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 CARNMT1Q8N4J0 409 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 KDM1BQ8NB78 822 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 CADM4Q8NFZ8 388 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 CEP76Q8TAP6 659 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 PRCCQ92733 491 aaPredicted RBP18.02■□□□□ 0.48
SMG6-214ENST00000573827 NOX5Q96PH1 765 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 NPY6RQ99463 290 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 GPR174Q9BXC1 333 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 FAM204AQ9H8W3 233 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 FANCLQ9NW38 375 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 DDIT4Q9NX09 232 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 NOCTQ9UK39 431 aaKnown RBP18.02■□□□□ 0.48
SMG6-214ENST00000573827 SIK3Q9Y2K2 1263 aa18.02■□□□□ 0.48
SMG6-214ENST00000573827 ADAMTS9Q9P2N4 1935 aa18.02■□□□□ 0.47
SMG6-214ENST00000573827 GIPC1O14908 333 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 ZNF18P17022 549 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 POLR2EP19388 210 aaKnown RBP18.01■□□□□ 0.47
SMG6-214ENST00000573827 PMLP29590 882 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 CCR1P32246 355 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 NOS2P35228 1153 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 SCNN1AP37088 669 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 JAM2P57087 298 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 NCAPHQ15003 741 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 HNRNPA1L2Q32P51 320 aaKnown RBP18.01■□□□□ 0.47
SMG6-214ENST00000573827 PLEKHG6Q3KR16 790 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 C5orf22Q49AR2 442 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 CXorf57Q6NSI4 855 aaKnown RBP18.01■□□□□ 0.47
SMG6-214ENST00000573827 CIR1Q86X95 450 aaPredicted RBP18.01■□□□□ 0.47
SMG6-214ENST00000573827 XYLT1Q86Y38 959 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 ZDHHC17Q8IUH5 632 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 ZNF683Q8IZ20 524 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 APCDD1Q8J025 514 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 FOXJ1Q92949 421 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 IGSF8Q969P0 613 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 ALG14Q96F25 216 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 GBP4Q96PP9 640 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 NUSAP1Q9BXS6 441 aaKnown RBP18.01■□□□□ 0.47
SMG6-214ENST00000573827 RSPH9Q9H1X1 276 aaPredicted RBP18.01■□□□□ 0.47
SMG6-214ENST00000573827 FBRSQ9HAH7 460 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 SLCO1B1Q9Y6L6 691 aa18.01■□□□□ 0.47
SMG6-214ENST00000573827 ITIH6Q6UXX5 1313 aa18■□□□□ 0.47
SMG6-214ENST00000573827 METTL12A8MUP2 240 aa18■□□□□ 0.47
SMG6-214ENST00000573827 GJB3O75712 270 aa18■□□□□ 0.47
SMG6-214ENST00000573827 ASLP04424 464 aa18■□□□□ 0.47
SMG6-214ENST00000573827 SLC2A3P11169 496 aa18■□□□□ 0.47
SMG6-214ENST00000573827 CHRNB2P17787 502 aa18■□□□□ 0.47
SMG6-214ENST00000573827 CSRP1P21291 193 aaKnown RBP18■□□□□ 0.47
SMG6-214ENST00000573827 MAOBP27338 520 aa18■□□□□ 0.47
SMG6-214ENST00000573827 OXTRP30559 389 aa18■□□□□ 0.47
SMG6-214ENST00000573827 MATKP42679 507 aa18■□□□□ 0.47
SMG6-214ENST00000573827 CXCR3P49682 368 aa18■□□□□ 0.47
SMG6-214ENST00000573827 PLK1P53350 603 aa18■□□□□ 0.47
SMG6-214ENST00000573827 NOMO3P69849 1222 aa18■□□□□ 0.47
SMG6-214ENST00000573827 ARID5AQ03989 594 aa18■□□□□ 0.47
SMG6-214ENST00000573827 CDH18Q13634 790 aa18■□□□□ 0.47
SMG6-214ENST00000573827 TAF3Q5VWG9 929 aa18■□□□□ 0.47
SMG6-214ENST00000573827 C14orf80Q86SX3 495 aa18■□□□□ 0.47
SMG6-214ENST00000573827 PIP4P1Q86T03 277 aa18■□□□□ 0.47
SMG6-214ENST00000573827 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
SMG6-214ENST00000573827 ATP6V0D2Q8N8Y2 350 aa18■□□□□ 0.47
SMG6-214ENST00000573827 TMEM35BQ8NCS4 154 aa18■□□□□ 0.47
SMG6-214ENST00000573827 OR52K2Q8NGK3 314 aa18■□□□□ 0.47
SMG6-214ENST00000573827 PGAP3Q96FM1 320 aaPredicted RBP18■□□□□ 0.47
SMG6-214ENST00000573827 VPS16Q9H269 839 aa18■□□□□ 0.47
SMG6-214ENST00000573827 PIGVQ9NUD9 493 aa18■□□□□ 0.47
SMG6-214ENST00000573827 SLCO3A1Q9UIG8 710 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms