RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 FOXC1Q12948 553 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 TAF5Q15542 800 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 PTPRNQ16849 979 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 EFHC1Q5JVL4 640 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 RABGAP1LQ5R372 815 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 ZNF776Q68DI1 518 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 MMS22LQ6ZRQ5 1243 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 C11orf57Q6ZUT1 292 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 FAM183BPQ6ZVS7 135 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 BEND5Q7L4P6 421 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC47A2Q86VL8 602 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 DEFB106AQ8N104 65 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 OR2I1PQ8NGU4 316 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 FIBINQ8TAL6 211 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC39A13Q96H72 371 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 ZNF419Q96HQ0 510 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 TMEM245Q9H330 911 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 FBRSQ9HAH7 460 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 CAPN10Q9HC96 672 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 SIX2Q9NPC8 291 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 PLCB1Q9NQ66 1216 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 SUN2Q9UH99 717 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 XPO7Q9UIA9 1087 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 PCDHGC3Q9UN70 934 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 ACACBO00763 2458 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 MAP1BP46821 2468 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 A0A1B0GTW7 788 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 KCNU1A8MYU2 1149 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 FOXN3O00409 490 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 RNASEH1O60930 286 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 DAB1O75553 588 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 ERBB2P04626 1255 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 GLI1P08151 1106 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC2A3P11169 496 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 CSRP1P21291 193 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 PMLP29590 882 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 CCR1P32246 355 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 CLCN1P35523 988 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 BPIFB4P59827 614 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 GRIK2Q13002 908 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 NME3Q13232 169 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 PITRM1Q5JRX3 1037 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 TAF3Q5VWG9 929 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 LRSAM1Q6UWE0 723 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 KIAA0907Q7Z7F0 614 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 CIR1Q86X95 450 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 DHX40Q8IX18 779 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 CADM4Q8NFZ8 388 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 MYEOVQ96EZ4 313 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 GBP4Q96PP9 640 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 BTBD1Q9H0C5 482 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 MTG2Q9H4K7 406 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 PRSS16Q9NQE7 514 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 SAMSN1Q9NSI8 373 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 ASNSD1Q9NWL6 643 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 TAB2Q9NYJ8 693 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 KIAA1522Q9P206 1035 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 EIF2B4Q9UI10 523 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 ERVW-1Q9UQF0 538 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 NCKAP1Q9Y2A7 1128 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 NFE2L3Q9Y4A8 694 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 FHOD1Q9Y613 1164 aa9.98□□□□□ -0.81
NPLOC4-212ENST00000573328 FAM47DPA6NHR8 397 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 GOLGA6L22H0YM25 854 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 M0QYT0 321 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 BCAT2O15382 392 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 SIN3BO75182 1162 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 FSBPO95073 299 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 SEMA4FO95754 770 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 IGLV3-19P01714 112 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 IGLV3-25P01717 112 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 PDGFRAP16234 1089 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 EEF1GP26641 437 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 ACSL1P33121 698 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 GGCXP38435 758 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 NNMTP40261 264 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 SULT1E1P49888 294 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 RNASE9P60153 205 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 RPS14P62263 151 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 ECT2LQ008S8 904 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC6A3Q01959 620 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 DRAP1Q14919 205 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 PTPN20Q4JDL3 420 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 TCP11X2Q5H9J9 407 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 FSCBQ5H9T9 825 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 MIIPQ5JXC2 388 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 FAM102AQ5T9C2 384 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 TTC39BQ5VTQ0 682 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 OLFML1Q6UWY5 402 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 WDTC1Q8N5D0 677 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 TMEM35BQ8NCS4 154 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 TTC17Q96AE7 1141 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 RPL10LQ96L21 214 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 RPRD1AQ96P16 312 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC2A13Q96QE2 648 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 C6orf106Q9H6K1 298 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms