RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SUSD6Q92537 303 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 PTPRN2Q92932 1015 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 ERLEC1Q96DZ1 483 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 SMOQ99835 787 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 ADAM33Q9BZ11 813 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 FRMD8Q9BZ67 464 aaPredicted RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 COG5Q9UP83 839 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 KPNA3O00505 521 aaPredicted RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 NDUFS3O75489 264 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 MAGEA4P43358 317 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 CCNI2Q6ZMN8 369 aaPredicted RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 C3orf62Q6ZUJ4 267 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 TMEM110Q86TL2 294 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 NETO2Q8NC67 525 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 SLC35F5Q8WV83 523 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 CFHR5Q9BXR6 569 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 PCDH18Q9HCL0 1135 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 C20orf96Q9NUD7 363 aaPredicted RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 DMGDHQ9UI17 866 aaKnown RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 TSR3Q9UJK0 312 aaKnown RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 INSL5Q9Y5Q6 135 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 GRIN2DO15399 1336 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 LZTS3O60299 673 aaPredicted RBP10.37□□□□□ -0.75
SMG6-213ENST00000573166 TYK2P29597 1187 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 GNGT1P63211 74 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 NNTQ13423 1086 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 FAM26DQ5JW98 314 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ZNF662Q6ZS27 426 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 FAM71BQ8TC56 605 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 BCAS4Q8TDM0 211 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ALKBH8Q96BT7 664 aaKnown RBP10.37□□□□□ -0.75
SMG6-213ENST00000573166 ARMC5Q96C12 935 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 STAMBPL1Q96FJ0 436 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 FICDQ9BVA6 458 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 TM6SF2Q9BZW4 377 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 NKX2-4Q9H2Z4 354 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 PCDH9Q9HC56 1237 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 RPS6KL1Q9Y6S9 549 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 C2orf81A6NN90 581 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 NEDD8-MDP1E9PL57 170 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 OPHN1O60890 802 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 DNAJC6O75061 913 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 MMP13P45452 471 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 TMPRSS15P98073 1019 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 TXNDC8Q6A555 127 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 BBS12Q6ZW61 710 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 LRRC8CQ8TDW0 803 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMG6-213ENST00000573166 ABHD8Q96I13 439 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ADGRE3Q9BY15 652 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ANKZF1Q9H8Y5 726 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ZNF510Q9Y2H8 683 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 COPEO14579 308 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 CLGNO14967 610 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ATP8B1O43520 1251 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ADH1CP00326 375 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 HAPLN1P10915 354 aaPredicted RBP10.37□□□□□ -0.75
SMG6-213ENST00000573166 AIF1P55008 147 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 IL9RQ01113 521 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 ZRANB3Q5FWF4 1079 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 SYPL2Q5VXT5 272 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 LINC01465Q8N7H1 131 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 OR10T2Q8NGX3 314 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 HES6Q96HZ4 224 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 C8orf48Q96LL4 319 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 RILPQ96NA2 401 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 TRHDEQ9UKU6 1024 aa10.37□□□□□ -0.75
SMG6-213ENST00000573166 CCDC195A0A1B0GUA6 201 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 HACD1B0YJ81 288 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 TEX28O15482 410 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 LCA5LO95447 670 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 IGSF6O95976 241 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 SFSWAPQ12872 951 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 ACBD5Q5T8D3 534 aaPredicted RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 SERPINA13PQ6UXR4 307 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 RNF135Q8IUD6 432 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 CREG2Q8IUH2 290 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 FBXO25Q8TCJ0 367 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 MFSD1Q9H3U5 465 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 PRDM16Q9HAZ2 1276 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 LTBP1Q14766 1721 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 hCG_1818297A0A087WSY0 165 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 WDR91A4D1P6 747 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 CES2O00748 559 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 ACSL4O60488 711 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 LUC7L3O95232 432 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 ACADMP11310 421 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 CLDN10P78369 228 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 CCDC142Q17RM4 750 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 BEND6Q5SZJ8 279 aaPredicted RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 TTC23LQ6PF05 361 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 LPCAT1Q8NF37 534 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 VAT1Q99536 393 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 GKN1Q9NS71 199 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 SALL4Q9UJQ4 1053 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 HBS1LQ9Y450 684 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 CFAP99D6REC4 459 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 CLDN11O75508 207 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms