RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 ETFBKMTQ8IXQ9 262 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 LGI2Q8N0V4 545 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 CARNMT1Q8N4J0 409 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 ALLCQ8N6M5 410 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 TXNDC5Q8NBS9 432 aaKnown RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 HJURPQ8NCD3 748 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 USP33Q8TEY7 942 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 EZH1Q92800 747 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 NELL1Q92832 810 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 AZIN2Q96A70 460 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 SLC39A13Q96H72 371 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 BTN2A3PQ96KV6 586 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 CFAP57Q96MR6 1250 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 PCDHB18PQ96TA0 734 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 TBCBQ99426 244 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMG6-211ENST00000572369 SCNM1Q9BWG6 230 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 FAM126AQ9BYI3 521 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 SLC2A11Q9BYW1 496 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 TRIM5Q9C035 493 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 CIPCQ9C0C6 399 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 SIK2Q9H0K1 926 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 ZDHHC4Q9NPG8 344 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 PRMT8Q9NR22 394 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 AIPL1Q9NZN9 384 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 BCCIPQ9P287 314 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMG6-211ENST00000572369 ABCA12Q86UK0 2595 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 F5P12259 2224 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 J3QKU1 62 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 ALDH1A2O94788 518 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 PDGFRAP16234 1089 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 TACR2P21452 398 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 SDC4P31431 198 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 SLC6A4P31645 630 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 CASP14P31944 242 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 FLT3P36888 993 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 WASP42768 502 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 FNTBP49356 437 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 DGKEP52429 567 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 ZBED6P86452 979 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 C1QBPQ07021 282 aaKnown RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 MESP2Q0VG99 397 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 CDH18Q13634 790 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 SLC25A52Q3SY17 297 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 MS4A13Q5J8X5 152 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 BRMS1LQ5PSV4 323 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 RABGAP1LQ5R372 815 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 PIK3R6Q5UE93 754 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 SPECC1LQ69YQ0 1117 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 NADSYN1Q6IA69 706 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 DNAJC24Q6P3W2 148 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 MAMSTRQ6ZN01 415 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 SYT13Q7L8C5 426 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 ANKS1BQ7Z6G8 1248 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 PHF13Q86YI8 300 aaPredicted RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 FAM217AQ8IXS0 508 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 CHPFQ8IZ52 775 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 CFAP52Q8N1V2 620 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 PGBD3Q8N328 593 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 CAMKK1Q8N5S9 505 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 EMC1Q8N766 993 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 ZNF557Q8N988 423 aaPredicted RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 TSTD1Q8NFU3 115 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 ERLEC1Q96DZ1 483 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 HHIPQ96QV1 700 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 NPY6RQ99463 290 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 IRX2Q9BZI1 471 aaPredicted RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 TTYH3Q9C0H2 523 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 TKTL2Q9H0I9 626 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 POLMQ9NP87 494 aaPredicted RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 ABCB8Q9NUT2 735 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 TMEM51Q9NW97 253 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 ZNHIT6Q9NWK9 470 aaKnown RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 XPO7Q9UIA9 1087 aaKnown RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 STOML2Q9UJZ1 356 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 TMEM59LQ9UK28 342 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 MMP17Q9ULZ9 603 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 CAPN11Q9UMQ6 739 aa8.05□□□□□ -1.12
SMG6-211ENST00000572369 BZW2Q9Y6E2 419 aaKnown RBP8.05□□□□□ -1.12
SMG6-211ENST00000572369 ITIH6Q6UXX5 1313 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 A0A0A0MRY4 1105 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 PRRT4C9JH25 899 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 MOCS3O95396 460 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 GJB6O95452 261 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 APBB3O95704 486 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 IGLV3-25P01717 112 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 GYPCP04921 128 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 SERPING1P05155 500 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 CISD3P0C7P0 127 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 PABPC1P11940 636 aaKnown RBP8.04□□□□□ -1.12
SMG6-211ENST00000572369 HOXB2P14652 356 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 POLR2EP19388 210 aaKnown RBP8.04□□□□□ -1.12
SMG6-211ENST00000572369 TFE3P19532 575 aaPredicted RBP8.04□□□□□ -1.12
SMG6-211ENST00000572369 GPD1P21695 349 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 HOXD9P28356 352 aaPredicted RBP8.04□□□□□ -1.12
SMG6-211ENST00000572369 NTSR1P30989 418 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 RDXP35241 583 aaKnown RBP8.04□□□□□ -1.12
SMG6-211ENST00000572369 PBX1P40424 430 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 PRKCIP41743 596 aa8.04□□□□□ -1.12
SMG6-211ENST00000572369 PXNP49023 591 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms