RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PIK3R6Q5UE93 754 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 KRT39Q6A163 491 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 ZNF605Q86T29 641 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 MMAAQ8IVH4 418 aaKnown RBP20.63■□□□□ 0.89
CCDC40-206ENST00000572083 OR2T34Q8NGX1 318 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 SNIP1Q8TAD8 396 aaKnown RBP20.63■□□□□ 0.89
CCDC40-206ENST00000572083 TSC1Q92574 1164 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 OMDQ99983 421 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 NRSN2Q9GZP1 204 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 MAPK8IP1Q9UQF2 711 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 A0A1W2PR77 199 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 YKT6O15498 198 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 BRINP1O60477 761 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 CSKP41240 450 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 BNIP3Q12983 259 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 SIX6OS1Q8N1H7 587 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 TTC39CQ8N584 583 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 SERAC1Q96JX3 654 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 PRICKLE1Q96MT3 831 aaPredicted RBP20.62■□□□□ 0.89
CCDC40-206ENST00000572083 ABCC13Q9NSE7 274 aa20.62■□□□□ 0.89
CCDC40-206ENST00000572083 NYNRINQ9P2P1 1898 aaKnown RBP20.62■□□□□ 0.89
CCDC40-206ENST00000572083 PSMC2P35998 433 aaKnown RBP20.61■□□□□ 0.89
CCDC40-206ENST00000572083 PSMD8P48556 350 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 ARRB1P49407 418 aaPredicted RBP20.61■□□□□ 0.89
CCDC40-206ENST00000572083 MXI1P50539 228 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 CCDC173Q0VFZ6 552 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 BST2Q10589 180 aaKnown RBP20.61■□□□□ 0.89
CCDC40-206ENST00000572083 NFIL3Q16649 462 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 MPP7Q5T2T1 576 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 FBXL13Q8NEE6 735 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 UBA3Q8TBC4 463 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 TTC17Q96AE7 1141 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 LMLNQ96KR4 655 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 MRGPRX3Q96LB0 322 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 RAB20Q9NX57 234 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 HESX1Q9UBX0 185 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 ADAMTS1Q9UHI8 967 aa20.61■□□□□ 0.89
CCDC40-206ENST00000572083 INTS6Q9UL03 887 aaKnown RBP20.61■□□□□ 0.89
CCDC40-206ENST00000572083 TTC34A8MYJ7 566 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 K7ELQ4 463 aaPredicted RBP20.6■□□□□ 0.89
CCDC40-206ENST00000572083 LCP1P13796 627 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 SLC8A1P32418 973 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 CTSOP43234 321 aaPredicted RBP20.6■□□□□ 0.89
CCDC40-206ENST00000572083 SLC11A2P49281 568 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 NXPH1P58417 271 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 DAOAP59103 153 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 SFSWAPQ12872 951 aaKnown RBP20.6■□□□□ 0.89
CCDC40-206ENST00000572083 SGO2Q562F6 1265 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 C9orf64Q5T6V5 341 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 SFMBT2Q5VUG0 894 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 MMS22LQ6ZRQ5 1243 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 GPR155Q7Z3F1 870 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 CARNMT1Q8N4J0 409 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 AADATQ8N5Z0 425 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 LSM14AQ8ND56 463 aaKnown RBP20.6■□□□□ 0.89
CCDC40-206ENST00000572083 FGF11Q92914 225 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 MYEOVQ96EZ4 313 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 FZD4Q9ULV1 537 aa20.6■□□□□ 0.89
CCDC40-206ENST00000572083 TEX51A0A1B0GUA7 166 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 TLR4O00206 839 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 PIK3R2O00459 728 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 CAPN9O14815 690 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 IRAK2O43187 625 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 ACSL4O60488 711 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 IGLV3-27P01718 113 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 ASLP04424 464 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 CD19P15391 556 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 GLDCP23378 1020 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 GTF2H1P32780 548 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 CCR5P51681 352 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 ADPRHP54922 357 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 PPP2CBP62714 309 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 RPS24P62847 133 aaKnown RBP20.59■□□□□ 0.89
CCDC40-206ENST00000572083 PPP2CAP67775 309 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 CXADRP78310 365 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 TLE3Q04726 772 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 ENPEPQ07075 957 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 NADSYN1Q6IA69 706 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 MSANTD2Q6P1R3 559 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 PCSK4Q6UW60 755 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 ZNF557Q8N988 423 aaPredicted RBP20.59■□□□□ 0.89
CCDC40-206ENST00000572083 HJURPQ8NCD3 748 aaPredicted RBP20.59■□□□□ 0.89
CCDC40-206ENST00000572083 OR14C36Q8NHC7 312 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 FIBINQ8TAL6 211 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 EEF2KMTQ96G04 330 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 FAXDC2Q96IV6 333 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 CLCA2Q9UQC9 943 aa20.59■□□□□ 0.89
CCDC40-206ENST00000572083 A0A1B0GVL5 298 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 C10orf142B7Z368 130 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 PRR29P0C7W0 189 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 CKMT2P17540 419 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 ADAM9Q13443 819 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 CDH18Q13634 790 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 FSCBQ5H9T9 825 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 NUGGCQ68CJ6 796 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 SND1Q7KZF4 910 aaKnown RBP eCLIP20.58■□□□□ 0.89
CCDC40-206ENST00000572083 ERICH1Q86X53 443 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 SPATS2Q86XZ4 545 aaKnown RBP20.58■□□□□ 0.89
CCDC40-206ENST00000572083 UNC45BQ8IWX7 931 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 SPACA3Q8IXA5 215 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms