RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 VANGL2Q9ULK5 521 aa10.59□□□□□ -0.71
GTF3C1-213ENST00000571886 GON4LQ3T8J9 2241 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 DOCK4Q8N1I0 1966 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 F5H5T6 163 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 CNTN5O94779 1100 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ALDH1A2O94788 518 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 RETP07949 1114 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 SKILP12757 684 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 FERP16591 822 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 PTMSP20962 102 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ABCB4P21439 1286 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 MZF1P28698 734 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 CTSOP43234 321 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 UBASH3AP57075 661 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ATP11AP98196 1134 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 NFKBIBQ15653 356 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 SKOR2Q2VWA4 1001 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 CCDC14Q49A88 953 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 USP39Q53GS9 565 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 SDE2Q6IQ49 451 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 TRIM72Q6ZMU5 477 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 MON1BQ7L1V2 547 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF571Q7Z3V5 609 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 PHF13Q86YI8 300 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF683Q8IZ20 524 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 AHI1Q8N157 1196 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 CCAR2Q8N163 923 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 DEFB119Q8N690 84 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 UCMAQ8WVF2 138 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 TTC17Q96AE7 1141 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 MRGPRX3Q96LB0 322 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 MRGPRX1Q96LB2 322 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 MKRN2Q9H000 416 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ARRDC1-AS1Q9H2J1 176 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 TMEM245Q9H330 911 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 SMOC1Q9H4F8 434 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 HAUS4Q9H6D7 363 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 WDCPQ9H6R7 721 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 AIPL1Q9NZN9 384 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 ADAM22Q9P0K1 906 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 SLC12A6Q9UHW9 1150 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 GVINP1Q7Z2Y8 2422 aa10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 TNRC6BQ9UPQ9 1833 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-213ENST00000571886 NUMA1Q14980 2115 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 C2CD4BA6NLJ0 364 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 TMCO5BA8MYB1 307 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 H0Y626 953 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 DDX3XO00571 662 aaKnown RBP eCLIP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 TIMM44O43615 452 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 ENDOD1O94919 500 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 SLC2A3P11169 496 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 PDGFRAP16234 1089 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 POLR2EP19388 210 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 TNFAIP3P21580 790 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 RFC1P35251 1148 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 CSKP41240 450 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 COPAP53621 1224 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 GSCP56915 257 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 EIF4HQ15056 248 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 ASIC2Q16515 512 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 CDO1Q16878 200 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 C5orf22Q49AR2 442 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 ALFQ53S48 1182 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 PITRM1Q5JRX3 1037 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 ACAD10Q6JQN1 1059 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 CXorf57Q6NSI4 855 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 WDR59Q6PJI9 974 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 ARCQ7LC44 396 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 FAM131BQ86XD5 332 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 TMEFF1Q8IYR6 380 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 MSANTD4Q8NCY6 345 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 WFIKKN2Q8TEU8 576 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 ALG14Q96F25 216 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 RRN3Q9NYV6 651 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 IFNKQ9P0W0 207 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 GMEB2Q9UKD1 530 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 STAP1Q9ULZ2 295 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 MYO6Q9UM54 1294 aa10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-213ENST00000571886 IGHV1OR15-9A0A0B4J2B8 117 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 GOLGA6L19H0YKK7 550 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 EPN2O95208 641 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 F9P00740 461 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 EPHX1P07099 455 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 DLDP09622 509 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 KRT3P12035 628 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 RRM1P23921 792 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 NSFP46459 744 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 RPL7AP62424 266 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 OGDHQ02218 1023 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 CDH18Q13634 790 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 SF3A2Q15428 464 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 FNDC3BQ53EP0 1204 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 BRMS1LQ5PSV4 323 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 PPP1R15BQ5SWA1 713 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 SFMBT2Q5VUG0 894 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms