RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 RXFP1Q9HBX9 757 aa20■□□□□ 0.79
RPAIN-210ENST00000571613 DNAJC17Q9NVM6 304 aaKnown RBP20■□□□□ 0.79
RPAIN-210ENST00000571613 PPARGC1AQ9UBK2 798 aaKnown RBP20■□□□□ 0.79
RPAIN-210ENST00000571613 DNMT3LQ9UJW3 386 aa20■□□□□ 0.79
RPAIN-210ENST00000571613 TRHDEQ9UKU6 1024 aa20■□□□□ 0.79
RPAIN-210ENST00000571613 HS3ST4Q9Y661 456 aa20■□□□□ 0.79
RPAIN-210ENST00000571613 CLUHO75153 1309 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 E7EVH7 732 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 IGLV3-27P01718 113 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 SHBGP04278 402 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 VAV1P15498 845 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 ATP5DP30049 168 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 ATP5C1P36542 298 aaKnown RBP19.99■□□□□ 0.79
RPAIN-210ENST00000571613 GARSP41250 739 aaKnown RBP19.99■□□□□ 0.79
RPAIN-210ENST00000571613 TUBP50607 506 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 SEMA5AQ13591 1074 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 PARP6Q2NL67 630 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 C16orf59Q7L2K0 433 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 TCEAL8Q8IYN2 117 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 ZBED8Q8IZ13 594 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 BADQ92934 168 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 CLP1Q92989 425 aaKnown RBP19.99■□□□□ 0.79
RPAIN-210ENST00000571613 ZBTB9Q96C00 473 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 LRRC39Q96DD0 335 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 C9orf72Q96LT7 481 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 ZNF512Q96ME7 567 aaPredicted RBP19.99■□□□□ 0.79
RPAIN-210ENST00000571613 PWWP2AQ96N64 755 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 MTIF3Q9H2K0 278 aaKnown RBP19.99■□□□□ 0.79
RPAIN-210ENST00000571613 PRDM10Q9NQV6 1147 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 TRPM5Q9NZQ8 1165 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 YIPF1Q9Y548 306 aa19.99■□□□□ 0.79
RPAIN-210ENST00000571613 E9PAM4 449 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 RNF103O00237 685 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 FGF18O76093 207 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 TMEM63AO94886 807 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 SEC24AO95486 1093 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 MOCS2O96007 188 aaPredicted RBP19.98■□□□□ 0.79
RPAIN-210ENST00000571613 CTSAP10619 480 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 EN2P19622 333 aaPredicted RBP19.98■□□□□ 0.79
RPAIN-210ENST00000571613 EMC10Q5UCC4 262 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 ATP11CQ8NB49 1132 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 MCOLN1Q9GZU1 580 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 RETREG1Q9H6L5 497 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 EIF2B3Q9NR50 452 aaKnown RBP19.98■□□□□ 0.79
RPAIN-210ENST00000571613 PSD3Q9NYI0 1048 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 IGSF9Q9P2J2 1179 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 SNX10Q9Y5X0 201 aa19.98■□□□□ 0.79
RPAIN-210ENST00000571613 SLC12A8A0AV02 714 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 GOLGA8MH3BSY2 632 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 PRRG1O14668 218 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 RGS16O15492 202 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-210ENST00000571613 SPAG6O75602 509 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 AGTP01019 485 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 APRTP07741 180 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 EPHB3P54753 998 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 NRLP54845 237 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 DNAJC21Q5F1R6 531 aaKnown RBP19.97■□□□□ 0.79
RPAIN-210ENST00000571613 HECTD3Q5T447 861 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 ITIH5Q86UX2 942 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 CCDC13Q8IYE1 715 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 RIBC1Q8N443 379 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-210ENST00000571613 TSGA13Q96PP4 275 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 RAD9AQ99638 391 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 ZBP1Q9H171 429 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 XAB2Q9HCS7 855 aaKnown RBP19.97■□□□□ 0.79
RPAIN-210ENST00000571613 BCCIPQ9P287 314 aaKnown RBP eCLIP19.97■□□□□ 0.79
RPAIN-210ENST00000571613 NEU3Q9UQ49 428 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 TCRBV7S3A2A0A539 114 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 LILRB3O75022 631 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 CCNCP24863 283 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 CCDC38Q502W7 563 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 TMEM240Q5SV17 173 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 KCTD16Q68DU8 428 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 ITPRIPL1Q6GPH6 555 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 MIB1Q86YT6 1006 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 NPWQ8N729 165 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 RTL3Q8N8U3 475 aaKnown RBP19.97■□□□□ 0.79
RPAIN-210ENST00000571613 ZYG11BQ9C0D3 744 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 NACA2Q9H009 215 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 ZMYND8Q9ULU4 1186 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-210ENST00000571613 RWDD3Q9Y3V2 267 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 ASB3Q9Y575 518 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 GREB1Q4ZG55 1949 aa19.97■□□□□ 0.79
RPAIN-210ENST00000571613 ZNF638Q14966 1978 aaKnown RBP19.96■□□□□ 0.79
RPAIN-210ENST00000571613 TLDC2A0PJX2 215 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 ZNF840PA6NDX5 716 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 MLNP12872 115 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 RHOQP17081 205 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 HMGA1P17096 107 aaKnown RBP19.96■□□□□ 0.79
RPAIN-210ENST00000571613 LMAN1P49257 510 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 WASHC5Q12768 1159 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 TERF2Q15554 542 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 MS4A13Q5J8X5 152 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 FNBP1LQ5T0N5 605 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 TIGD7Q6NT04 549 aaPredicted RBP19.96■□□□□ 0.79
RPAIN-210ENST00000571613 PALM2Q8IXS6 379 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 TAB3Q8N5C8 712 aaPredicted RBP19.96■□□□□ 0.79
RPAIN-210ENST00000571613 HERVK_113Q902F9 699 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 LRRC4CQ9HCJ2 640 aa19.96■□□□□ 0.79
RPAIN-210ENST00000571613 KLHL8Q9P2G9 620 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms