RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MANEALQ5VSG8 457 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 TXNRD3NBQ6F5E7 133 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 CXorf57Q6NSI4 855 aaKnown RBP7.22□□□□□ -1.25
SMG6-209ENST00000571442 C1orf228Q6PIY5 440 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 RAD9BQ6WBX8 426 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 STRADAQ7RTN6 431 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 KIAA0907Q7Z7F0 614 aaPredicted RBP7.22□□□□□ -1.25
SMG6-209ENST00000571442 ADIPOR2Q86V24 386 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 APCDD1Q8J025 514 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 CARNMT1Q8N4J0 409 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 ALLCQ8N6M5 410 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMG6-209ENST00000571442 SPC24Q8NBT2 197 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 CYB5D2Q8WUJ1 264 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 ATRIPQ8WXE1 791 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 RNF34Q969K3 372 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 ALG14Q96F25 216 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 XPO6Q96QU8 1125 aaKnown RBP7.22□□□□□ -1.25
SMG6-209ENST00000571442 HHIPQ96QV1 700 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 WDCPQ9H6R7 721 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 CD248Q9HCU0 757 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 ABCB8Q9NUT2 735 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 NDFIP2Q9NV92 336 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 RRN3Q9NYV6 651 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 MPP6Q9NZW5 540 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 SLC27A6Q9Y2P4 619 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 REXO2Q9Y3B8 237 aaKnown RBP7.22□□□□□ -1.25
SMG6-209ENST00000571442 RAD54BQ9Y620 910 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 EP300Q09472 2414 aaPredicted RBP7.22□□□□□ -1.25
SMG6-209ENST00000571442 VPS13AQ96RL7 3174 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 NYNRINQ9P2P1 1898 aaKnown RBP7.21□□□□□ -1.25
SMG6-209ENST00000571442 IGLV3-10A0A075B6K4 115 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 RCCD1A6NED2 376 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 DRGXA6NNA5 263 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 CHURC1-FNTBB4DL54 471 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 E9PAM4 449 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 F5H5T6 163 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 NCAM2O15394 837 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 LUC7L3O95232 432 aaKnown RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 F9P00740 461 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CYBBP04839 570 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 PABPC1P11940 636 aaKnown RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 HLA-EP13747 358 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 PRKCHP24723 683 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 PSMA2P25787 234 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 MZF1P28698 734 aaPredicted RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 MIPP30301 263 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CDC25BP30305 580 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 ADRA1BP35368 520 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CSKP41240 450 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 IL12RB1P42701 662 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CTSOP43234 321 aaPredicted RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 TNFRSF4P43489 277 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 AMPD2Q01433 879 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CSTF1Q05048 431 aaKnown RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 SRSF5Q13243 272 aaKnown RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 PTPRNQ16849 979 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 MPP7Q5T2T1 576 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 KIAA1211LQ6NV74 962 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 DCUN1D2Q6PH85 259 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CHST9Q7L1S5 443 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CNGA4Q8IV77 575 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 MFN1Q8IWA4 741 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CCAR2Q8N163 923 aaKnown RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 SYNPOQ8N3V7 929 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 SPEM1Q8N4L4 309 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 ZNF366Q8N895 744 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 TXNDC5Q8NBS9 432 aaKnown RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 HJURPQ8NCD3 748 aaPredicted RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 FIBINQ8TAL6 211 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 NELL1Q92832 810 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 MYO19Q96H55 970 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 RPRD1AQ96P16 312 aaPredicted RBP7.21□□□□□ -1.26
SMG6-209ENST00000571442 CNPY3Q9BT09 278 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 NUP85Q9BW27 656 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 SLC6A17Q9H1V8 727 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 MTG2Q9H4K7 406 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 OSGEPQ9NPF4 335 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CD93Q9NPY3 652 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 PARVAQ9NVD7 372 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 CACNA2D2Q9NY47 1150 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 PCSK1NQ9UHG2 260 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 GGA2Q9UJY4 613 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 FZD10Q9ULW2 581 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 STARD13Q9Y3M8 1113 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 OR51B4Q9Y5P0 310 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 R4GN57 208 aa7.21□□□□□ -1.26
SMG6-209ENST00000571442 NUP205Q92621 2012 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 A0A0D9SEW6 157 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 A0A1W2PQF6 199 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ANKRD62A6NC57 917 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 LAMTOR5O43504 91 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 AKR1B10O60218 316 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 SRGAP2O75044 1071 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 LRCH4O75427 683 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 LRIG2O94898 1065 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 PAPSS2O95340 614 aaPredicted RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 MYBL1P10243 752 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 SLC2A3P11169 496 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms