RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KRT73Q86Y46 540 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 C11orf44Q8N8P7 122 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 CNBD1Q8NA66 436 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 EDC3Q96F86 508 aaKnown RBP4.69□□□□□ -1.66
NUP88-202ENST00000570937 VPS50Q96JG6 964 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 C5orf34Q96MH7 638 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 EIF2AQ9BY44 585 aaKnown RBP4.69□□□□□ -1.66
NUP88-202ENST00000570937 NYXQ9GZU5 481 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 SLC25A32Q9H2D1 315 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 MYH16Q9H6N6 1097 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 AS3MTQ9HBK9 375 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 ZNF70Q9UC06 446 aaPredicted RBP4.69□□□□□ -1.66
NUP88-202ENST00000570937 COL5A3P25940 1745 aaPredicted RBP4.69□□□□□ -1.66
NUP88-202ENST00000570937 SIPA1L3O60292 1781 aaPredicted RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 UBR2Q8IWV8 1755 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 CYP2D7A0A087X1C5 515 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 A0A0G2JLW4 131 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 CAND2O75155 1236 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 GCATO75600 419 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 DDX58O95786 925 aaKnown RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 ZNF853P0CG23 659 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 DPEP1P16444 411 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 KELP23276 732 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 MPGP29372 298 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 SLC5A2P31639 672 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 ATICP31939 592 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 COPB1P53618 953 aaKnown RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 DEUP1Q05D60 604 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 DDR1Q08345 913 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 MTAPQ13126 283 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 PARP10Q53GL7 1025 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 CCDC30Q5VVM6 783 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 RRAGBQ5VZM2 374 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 TBC1D9BQ66K14 1250 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 ZNF626Q68DY1 528 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 SLC18B1Q6NT16 456 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 KIAA0408Q6ZU52 694 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 PPP1R42Q7Z4L9 355 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 YTHDF3Q7Z739 585 aaKnown RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 DPP9Q86TI2 863 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 LIX1LQ8IVB5 337 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 CCAR1Q8IX12 1150 aaKnown RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 C12orf76Q8N812 135 aaPredicted RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.68□□□□□ -1.66
NUP88-202ENST00000570937 MAFAQ8NHW3 353 aaPredicted RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 BRI3BPQ8WY22 251 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 CCDC136Q96JN2 1154 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 WDR24Q96S15 920 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 TBCBQ99426 244 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 GDF15Q99988 308 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 QTRT1Q9BXR0 403 aaKnown RBP4.68□□□□□ -1.66
NUP88-202ENST00000570937 MAGEB5Q9BZ81 275 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 NIP7Q9Y221 180 aaKnown RBP eCLIP4.68□□□□□ -1.66
NUP88-202ENST00000570937 BTBD3Q9Y2F9 522 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 TJP1Q07157 1748 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 MAP3K15Q6ZN16 1313 aa4.68□□□□□ -1.66
NUP88-202ENST00000570937 VIRMAQ69YN4 1812 aaKnown RBP4.67□□□□□ -1.66
NUP88-202ENST00000570937 OR2W5A6NFC9 320 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 TMEM232C9JQI7 657 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 APOL1O14791 398 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 CBFA2T3O75081 653 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 WDR47O94967 919 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 TMEM225BP0DP42 221 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 ARP10275 920 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 YY1P25490 414 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 LMO1P25800 156 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 PIP4K2AP48426 406 aaPredicted RBP4.67□□□□□ -1.66
NUP88-202ENST00000570937 AIMP1Q12904 312 aaKnown RBP4.67□□□□□ -1.66
NUP88-202ENST00000570937 DNASE1L3Q13609 305 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 DAZAP2Q15038 168 aaPredicted RBP4.67□□□□□ -1.66
NUP88-202ENST00000570937 SUPT20HL1Q3ZLR7 823 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 MTX3Q5HYI7 312 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 MORN5Q5VZ52 161 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 ABLIM2Q6H8Q1 611 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 MRNIPQ6NTE8 343 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 TMEM65Q6PI78 240 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 CRTC1Q6UUV9 634 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 COPS6Q7L5N1 327 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 C2CD5Q86YS7 1000 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 CCDC33Q8N5R6 958 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 LRRC46Q96FV0 321 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 TMX4Q9H1E5 349 aaPredicted RBP4.67□□□□□ -1.66
NUP88-202ENST00000570937 WDR26Q9H7D7 661 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 NRIP3Q9NQ35 241 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 RXFP3Q9NSD7 469 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 SEMA5BQ9P283 1151 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 FZD4Q9ULV1 537 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 MYH14Q7Z406 1995 aaKnown RBP4.67□□□□□ -1.66
NUP88-202ENST00000570937 RNF123Q5XPI4 1314 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 TUBGCP6Q96RT7 1819 aa4.67□□□□□ -1.66
NUP88-202ENST00000570937 COL24A1Q17RW2 1714 aa4.66□□□□□ -1.66
NUP88-202ENST00000570937 DLG5Q8TDM6 1919 aa4.66□□□□□ -1.66
NUP88-202ENST00000570937 C10orf71Q711Q0 1435 aa4.66□□□□□ -1.66
NUP88-202ENST00000570937 GOLGB1Q14789 3259 aaKnown RBP4.66□□□□□ -1.66
NUP88-202ENST00000570937 SMIM35A0A1B0GVV1 85 aa4.66□□□□□ -1.66
NUP88-202ENST00000570937 WDR91A4D1P6 747 aa4.66□□□□□ -1.66
NUP88-202ENST00000570937 COQ9O75208 318 aa4.66□□□□□ -1.66
NUP88-202ENST00000570937 BCAR3O75815 825 aa4.66□□□□□ -1.66
NUP88-202ENST00000570937 SFPQP23246 707 aaKnown RBP eCLIP4.66□□□□□ -1.66
NUP88-202ENST00000570937 MST1P26927 711 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms