RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 COPAP53621 1224 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 SNX16P57768 344 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 RPS24P62847 133 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 CDK17Q00537 523 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 CAMK2GQ13555 558 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 DCAF6Q58WW2 860 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 ZC3H12AQ5D1E8 599 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 MS4A13Q5J8X5 152 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 WDR45BQ5MNZ6 344 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 KIAA0907Q7Z7F0 614 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 CARNMT1Q8N4J0 409 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 C1orf131Q8NDD1 294 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 OR2T3Q8NH03 318 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 ZNF419Q96HQ0 510 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 BTN2A3PQ96KV6 586 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 CPXM1Q96SM3 734 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 GTPBP2Q9BX10 602 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 LHX5Q9H2C1 402 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 TMEM245Q9H330 911 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 FBRSQ9HAH7 460 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 SIX2Q9NPC8 291 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 ITM2CQ9NQX7 267 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 WSB2Q9NYS7 404 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 AJAP1Q9UKB5 411 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 THADAQ6YHU6 1953 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 KCNJ18B7U540 433 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 F5H5T6 163 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 SMAPO00193 183 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 LUC7L3O95232 432 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 IGLV3-25P01717 112 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 ASLP04424 464 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 PNMA6AP0CW24 399 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 BPIFB4P59827 614 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 ST8SIA6P61647 398 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 RAPGEF1Q13905 1077 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 KCNJ12Q14500 433 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 PTPRNQ16849 979 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 EFHC1Q5JVL4 640 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 MIIPQ5JXC2 388 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 N4BP2L1Q5TBK1 243 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 SH3PXD2AQ5TCZ1 1133 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 RAP1GAP2Q684P5 730 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC47A2Q86VL8 602 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 LGI2Q8N0V4 545 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 HDDC3Q8N4P3 179 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 ZNF366Q8N895 744 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 CADM4Q8NFZ8 388 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 FIBINQ8TAL6 211 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 GPR174Q9BXC1 333 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 CAPN10Q9HC96 672 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 FSCN3Q9NQT6 498 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 ASNSD1Q9NWL6 643 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 DDIT4Q9NX09 232 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC12A6Q9UHW9 1150 aa12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 XPO7Q9UIA9 1087 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 TPRP12270 2363 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-205ENST00000570828 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CHD8Q9HCK8 2581 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CEP295Q9C0D2 2601 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 SYNJ2BP-COX16A0A087WUM0 186 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 H0Y626 953 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 FOXN3O00409 490 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 MOCS3O95396 460 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 SYPP08247 313 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC2A3P11169 496 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CSRP1P21291 193 aaKnown RBP12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 ABCB4P21439 1286 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 TACR2P21452 398 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 EEF1GP26641 437 aaKnown RBP12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CCR1P32246 355 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CSKP41240 450 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 PITX1P78337 314 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 TAF5Q15542 800 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 PLEKHG6Q3KR16 790 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 TTC31Q49AM3 519 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CT47A1Q5JQC4 288 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 OR6B2Q6IFH4 312 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 OLFML1Q6UWY5 402 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 FAM183BPQ6ZVS7 135 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 FAM124AQ86V42 546 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 FAM71AQ8IYT1 594 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CFAP52Q8N1V2 620 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 WDTC1Q8N5D0 677 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 RNF34Q969K3 372 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 MYEOVQ96EZ4 313 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 GBP4Q96PP9 640 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC2A13Q96QE2 648 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 NUP58Q9BVL2 599 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 PRSS16Q9NQE7 514 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms