RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 XRRA1Q6P2D8 792 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 CASC4Q6P4E1 433 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 ZNF781Q8N8C0 355 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 GPRASP2Q96D09 838 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 TMEM216Q9P0N5 145 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 MAFGO15525 162 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 H2AFYO75367 372 aaKnown RBP15.79■□□□□ 0.12
SMG6-207ENST00000570756 GCATO75600 419 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 HMGCRP04035 888 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 PROZP22891 400 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 YY1P25490 414 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 VARSP26640 1264 aaKnown RBP15.79■□□□□ 0.12
SMG6-207ENST00000570756 ADSLP30566 484 aaPredicted RBP15.79■□□□□ 0.12
SMG6-207ENST00000570756 ASPAP45381 313 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 SEZ6Q53EL9 994 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 TMEM102Q8N9M5 508 aaPredicted RBP15.79■□□□□ 0.12
SMG6-207ENST00000570756 VPS45Q9NRW7 570 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 PNPLA3Q9NST1 481 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 IGSF9Q9P2J2 1179 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 TDRKHQ9Y2W6 561 aaKnown RBP15.79■□□□□ 0.12
SMG6-207ENST00000570756 NR2E3Q9Y5X4 410 aa15.79■□□□□ 0.12
SMG6-207ENST00000570756 SIP14410 1827 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 KPNA7A9QM74 516 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 TOMM70O94826 608 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 PRKCGP05129 697 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 ZNF26P17031 533 aaPredicted RBP15.78■□□□□ 0.12
SMG6-207ENST00000570756 ESRRGP62508 458 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 ART3Q13508 389 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 C16orf72Q14CZ0 275 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 SURF1Q15526 300 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 XKR3Q5GH77 459 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 TDRD5Q8NAT2 981 aaKnown RBP15.78■□□□□ 0.12
SMG6-207ENST00000570756 HM13Q8TCT9 377 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 TMEM143Q96AN5 459 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 RMND5BQ96G75 393 aaPredicted RBP15.78■□□□□ 0.12
SMG6-207ENST00000570756 ZNF597Q96LX8 424 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 PORCNQ9H237 461 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 WDR41Q9HAD4 459 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 H3BNH8 94 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 XPO1O14980 1071 aaKnown RBP15.78■□□□□ 0.12
SMG6-207ENST00000570756 CFLARO15519 480 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 METTL18O95568 372 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 ALDH1B1P30837 517 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 HK2P52789 917 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 PKNOX1P55347 436 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 CEACAM7Q14002 265 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 BOLA3Q53S33 107 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 FAM182AQ5T1J6 154 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 SLC9A4Q6AI14 798 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 CYP4V2Q6ZWL3 525 aaPredicted RBP15.78■□□□□ 0.12
SMG6-207ENST00000570756 OR52B2Q96RD2 323 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 SLC4A5Q9BY07 1137 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 TBC1D23Q9NUY8 699 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 TUBGCP4Q9UGJ1 667 aa15.78■□□□□ 0.12
SMG6-207ENST00000570756 WDR27A2RRH5 827 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 ZNF701M0R085 212 aaPredicted RBP15.77■□□□□ 0.12
SMG6-207ENST00000570756 MLNP12872 115 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 ENO3P13929 434 aaPredicted RBP15.77■□□□□ 0.12
SMG6-207ENST00000570756 ADORA2AP29274 412 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 CCND2P30279 289 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 PPARGP37231 505 aaPredicted RBP15.77■□□□□ 0.12
SMG6-207ENST00000570756 PHKA2P46019 1235 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 MS4A2Q01362 244 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 TMEM62Q0P6H9 643 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 MTA1Q13330 715 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 RFTN1Q14699 578 aaPredicted RBP15.77■□□□□ 0.12
SMG6-207ENST00000570756 HERC3Q15034 1050 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 STYK1Q6J9G0 422 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 CARM1Q86X55 608 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 PQLC3Q8N755 202 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 RCN3Q96D15 328 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 CAAP1Q9H8G2 361 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 EFCAB1Q9HAE3 211 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 BARX2Q9UMQ3 279 aaPredicted RBP15.77■□□□□ 0.12
SMG6-207ENST00000570756 RNF11Q9Y3C5 154 aa15.77■□□□□ 0.12
SMG6-207ENST00000570756 KANSL1LA0AUZ9 987 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 TADA2AO75478 443 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 BMP10O95393 424 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 PDGFRAP16234 1089 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 SEMA5AQ13591 1074 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 STILQ15468 1287 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 MGAT5BQ3V5L5 792 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 PDCD4Q53EL6 469 aaKnown RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 PPM1LQ5SGD2 360 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 RWDD4Q6NW29 188 aaKnown RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 NCCRP1Q6ZVX7 275 aaPredicted RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 CCDC60Q8IWA6 550 aaPredicted RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 MAPK15Q8TD08 544 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 GIPC3Q8TF64 312 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 TMIGD2Q96BF3 282 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 ILKAPQ9H0C8 392 aaPredicted RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 PDZD7Q9H5P4 517 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 TMEM134Q9H6X4 195 aa15.77■□□□□ 0.11
SMG6-207ENST00000570756 LIN28AQ9H9Z2 209 aaKnown RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 RAVER2Q9HCJ3 691 aaKnown RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 JPH1Q9HDC5 661 aaPredicted RBP15.77■□□□□ 0.11
SMG6-207ENST00000570756 BOLA2-SMG1P6H3BVE0 249 aa15.76■□□□□ 0.11
SMG6-207ENST00000570756 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
SMG6-207ENST00000570756 PGAM1P18669 254 aa15.76■□□□□ 0.11
SMG6-207ENST00000570756 IL4RP24394 825 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms