RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 LLPHQ9BRT6 129 aaKnown RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 FUCA2Q9BTY2 467 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 DPH1Q9BZG8 443 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 APOBEC3GQ9HC16 384 aaKnown RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 SEL1LQ9UBV2 794 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 SFMBT1Q9UHJ3 866 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 PAXBP1Q9Y5B6 917 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 USP3Q9Y6I4 520 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 ZNF233A6NK53 670 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 LRRIQ3A6PVS8 624 aaPredicted RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 NPC1O15118 1278 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 LZTS3O60299 673 aaPredicted RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 DFNA5O60443 496 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 STAU1O95793 577 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 LDHAP00338 332 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 C4BPAP04003 597 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 DLDP09622 509 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 IDEP14735 1019 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 TNNI1P19237 187 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 SCP2P22307 547 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 SLC8A1P32418 973 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CSKP41240 450 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CCR5P51681 352 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CLDN2P57739 230 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 TRIP4Q15650 581 aaPredicted RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 CDKN3Q16667 212 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 HNRNPA1L2Q32P51 320 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 FAM133BQ5BKY9 247 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 ARL6IP4Q66PJ3 421 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 NAPEPLDQ6IQ20 393 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 FAM173BQ6P4H8 233 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 USP30Q70CQ3 517 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CCDC186Q7Z3E2 898 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 APCDD1Q8J025 514 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 KRI1Q8N9T8 703 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 OR14C36Q8NHC7 312 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 UCMAQ8WVF2 138 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 PTPRN2Q92932 1015 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 FAM131CQ96AQ9 280 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CALML4Q96GE6 196 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 TCEAL2Q9H3H9 227 aaPredicted RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 ERVMER34-1Q9H9K5 563 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 OLFML3Q9NRN5 406 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 AGPAT3Q9NRZ7 376 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 COMMD8Q9NX08 183 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 MARCH2Q9P0N8 246 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CYTH4Q9UIA0 394 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 XPO7Q9UIA9 1087 aaKnown RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 RABGEF1Q9UJ41 708 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 FBXO2Q9UK22 296 aaPredicted RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 LIMCH1Q9UPQ0 1083 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 PLAAQ9Y263 795 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 DAAM1Q9Y4D1 1078 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 HEMK1Q9Y5R4 338 aaPredicted RBP7.5□□□□□ -1.21
SMG6-205ENST00000570659 CLIC4Q9Y696 253 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CELSR2Q9HCU4 2923 aa7.5□□□□□ -1.21
SMG6-205ENST00000570659 CENPEQ02224 2701 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 K7ESM1 405 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 PIAS2O75928 621 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 TNFSF15O95150 251 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 NTRK1P04629 796 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 FAM200BP0CF97 657 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 CDK4P11802 303 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 ARRB1P49407 418 aaPredicted RBP7.49□□□□□ -1.21
SMG6-205ENST00000570659 RPS24P62847 133 aaKnown RBP7.49□□□□□ -1.21
SMG6-205ENST00000570659 FOXK1P85037 733 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 DAB2P98082 770 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 ZBTB16Q05516 673 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 BMT2Q1RMZ1 405 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 RILPL1Q5EBL4 403 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 PPP1R26Q5T8A7 1209 aaPredicted RBP7.49□□□□□ -1.21
SMG6-205ENST00000570659 AGBL4Q5VU57 503 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 OR6B2Q6IFH4 312 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 IGF2-ASQ6U949 168 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.49□□□□□ -1.21
SMG6-205ENST00000570659 CLEC14AQ86T13 490 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 NELFCDQ8IXH7 590 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 KCTD17Q8N5Z5 321 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 MFSD2AQ8NA29 543 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 TMEM145Q8NBT3 493 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 ENGASEQ8NFI3 743 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 OR13H1Q8NG92 308 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 OR52K2Q8NGK3 314 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 IFI44Q8TCB0 444 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 EDEM1Q92611 657 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 PMEPA1Q969W9 287 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 FUBP1Q96AE4 644 aaKnown RBP7.49□□□□□ -1.21
SMG6-205ENST00000570659 RPL10LQ96L21 214 aaKnown RBP7.49□□□□□ -1.21
SMG6-205ENST00000570659 AK8Q96MA6 479 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 DEPDC7Q96QD5 511 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 SLC2A11Q9BYW1 496 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 FBXO44Q9H4M3 255 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 VRTNQ9H8Y1 702 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 THSD1Q9NS62 852 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 PANK4Q9NVE7 773 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 ATXN7L1Q9ULK2 861 aaPredicted RBP7.49□□□□□ -1.21
SMG6-205ENST00000570659 LRRK1Q38SD2 2015 aa7.49□□□□□ -1.21
SMG6-205ENST00000570659 CRYBG3Q68DQ2 2970 aa7.48□□□□□ -1.21
SMG6-205ENST00000570659 RAD51BO15315 384 aa7.48□□□□□ -1.21
SMG6-205ENST00000570659 SPINT1O43278 529 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms