RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ALG3Q92685 438 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 USP13Q92995 863 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SLC39A13Q96H72 371 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 CAPZA3Q96KX2 299 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ASB16Q96NS5 453 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SLC22A12Q96S37 553 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 CYP2S1Q96SQ9 504 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 OSBPL9Q96SU4 736 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 KLF16Q9BXK1 252 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 TLR10Q9BXR5 811 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SLC46A2Q9BY10 475 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 RNF38Q9H0F5 515 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 RAB6CQ9H0N0 254 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 S1PR5Q9H228 398 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 POMKQ9H5K3 350 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 CATSPERBQ9H7T0 1116 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 PCDH18Q9HCL0 1135 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZFP14Q9HCL3 533 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 MTMR10Q9NXD2 777 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 DONSONQ9NYP3 566 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 CALCOCO1Q9P1Z2 691 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 RCOR3Q9P2K3 495 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 TBC1D14Q9P2M4 693 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 OR12D3Q9UGF7 316 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 CDH22Q9UJ99 828 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 MAP4K5Q9Y4K4 846 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 RANBP2P49792 3224 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZNF487B1APH4 448 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CES2O00748 559 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 APOL1O14791 398 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 SCAMP3O14828 347 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 MOSPD3O75425 235 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 LRIG2O94898 1065 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TJP3O95049 919 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ADH1CP00326 375 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 FGGP02679 453 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TCF3P15923 654 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 GOT1P17174 413 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TACR2P21452 398 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 KDELR1P24390 212 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 L1CAMP32004 1257 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CHKAP35790 457 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 LTBRP36941 435 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 VCPP55072 806 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRR20EP86478 221 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRR20CP86479 221 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRR20DP86480 221 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRR20BP86481 221 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRR20AP86496 221 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CDH18Q13634 790 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TUBB2AQ13885 445 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 DPYSL3Q14195 570 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZNF77Q15935 545 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CA9Q16790 459 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 WHAMMP3Q1A5X7 153 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 LONRF2Q1L5Z9 754 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 AAK1Q2M2I8 961 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 MS4A13Q5J8X5 152 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 FAM78AQ5JUQ0 283 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ADGRF1Q5T601 910 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PIK3R6Q5UE93 754 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PAPD7Q5XG87 772 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TXNRD3NBQ6F5E7 133 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TMCO3Q6UWJ1 677 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TRIM67Q6ZTA4 783 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 RFX8Q6ZV50 586 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CYP4V2Q6ZWL3 525 aaPredicted RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZNF354CQ86Y25 554 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PYROXD2Q8N2H3 581 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZNF557Q8N988 423 aaPredicted RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 MNS1Q8NEH6 495 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 BPIFB1Q8TDL5 484 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 DEPDC1BQ8WUY9 529 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ATP2A3Q93084 1043 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 OTUB2Q96DC9 234 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CSPG4P5Q96PW8 444 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 KCTD15Q96SI1 283 aaPredicted RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 FERMT1Q9BQL6 677 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TUBB2BQ9BVA1 445 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 OSBPL8Q9BZF1 889 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZYG11BQ9C0D3 744 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 OSBPL2Q9H1P3 480 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRDM16Q9HAZ2 1276 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 TMPRSS4Q9NRS4 437 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 GKN1Q9NS71 199 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 OBP2AQ9NY56 170 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 RNF14Q9UBS8 474 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 XPO7Q9UIA9 1087 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CDV3Q9UKY7 258 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 AGO1Q9UL18 857 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 VANGL2Q9ULK5 521 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 CCL26Q9Y258 94 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 HS3ST4Q9Y661 456 aa6.79□□□□□ -1.32
CTDNEP1-204ENST00000570484 hCG_1818297A0A087WSY0 165 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 A0A1B0GVM2 712 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 TCAF2A6NFQ2 919 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 HEPACAM2A8MVW5 462 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 MCF2LO15068 1137 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 MBTPS2O43462 519 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms