RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 DENND1BQ6P3S1 775 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 LRSAM1Q6UWE0 723 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 ADAT2Q7Z6V5 191 aaKnown RBP8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 MMAAQ8IVH4 418 aaKnown RBP8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 HJURPQ8NCD3 748 aaPredicted RBP8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 FIBINQ8TAL6 211 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 LMO3Q8TAP4 145 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 SPATA20Q8TB22 786 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 NELFBQ8WX92 580 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 IRGQQ8WZA9 623 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 MYO19Q96H55 970 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 LMLNQ96KR4 655 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 FCRL2Q96LA5 508 aaPredicted RBP8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 KREMEN1Q96MU8 473 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLC6A18Q96N87 628 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 NEUROG2Q9H2A3 272 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 CCDC86Q9H6F5 360 aaKnown RBP8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 METTL14Q9HCE5 456 aaKnown RBP8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 ACP6Q9NPH0 428 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 TOR4AQ9NXH8 423 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 SUN2Q9UH99 717 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLCO3A1Q9UIG8 710 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 CTNND2Q9UQB3 1225 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 CEP83Q9Y592 693 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 PTPRBP23467 1997 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 DMXL2Q8TDJ6 3036 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 DSPP15924 2871 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 MUC22E2RYF6 1773 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 SYNJ2BP-COX16A0A087WUM0 186 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 PLK4O00444 970 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 WNT9AO14904 365 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 FLRT2O43155 660 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 IRAK2O43187 625 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 RNASEH2AO75792 299 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 LETM1O95202 739 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 IGHV4-34P06331 123 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZNF883P0CG24 379 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 BMP6P22004 513 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 CD27P26842 260 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 PSMD8P48556 350 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 GALCP54803 685 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 CLDN6P56747 220 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 PITX1P78337 314 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZBTB16Q05516 673 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 STIM1Q13586 685 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 SUZ12Q15022 739 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 CST6Q15828 149 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZC3H12AQ5D1E8 599 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 MS4A13Q5J8X5 152 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 PITRM1Q5JRX3 1037 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 MPP7Q5T2T1 576 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 RAP1GAP2Q684P5 730 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 KIAA0895LQ68EN5 471 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 TTI2Q6NXR4 508 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 GJB7Q6PEY0 223 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 NCEH1Q6PIU2 408 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 GLRX5Q86SX6 157 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 TAC4Q86UU9 113 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 CIR1Q86X95 450 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 GATAD2AQ86YP4 633 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 CREBRFQ8IUR6 639 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 APCDD1Q8J025 514 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 LGI2Q8N0V4 545 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 SCML4Q8N228 414 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 STK40Q8N2I9 435 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 BAHD1Q8TBE0 780 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 HNRNPLLQ8WVV9 542 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 TTC17Q96AE7 1141 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 DHTKD1Q96HY7 919 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 RPL10LQ96L21 214 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 MRGPRX3Q96LB0 322 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 HSFY1Q96LI6 401 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 DDX50Q9BQ39 737 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 ORAI3Q9BRQ5 295 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 GTPBP4Q9BZE4 634 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 PCED1AQ9H1Q7 454 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 RSPH9Q9H1X1 276 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 PABPC3Q9H361 631 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 EBF2Q9HAK2 575 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 SGK2Q9HBY8 427 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 COX16Q9P0S2 106 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 ERVW-1Q9UQF0 538 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 NCKAP1Q9Y2A7 1128 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 RAXQ9Y2V3 346 aa8.92□□□□□ -0.98
CTDNEP1-203ENST00000570385 TYW5A2RUC4 315 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 PPP1R3GB7ZBB8 358 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 E5RJQ4 531 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CBX4O00257 560 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CAPN9O14815 690 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 PAPSS1O43252 624 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 RNASEH1O60930 286 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 FBXO21O94952 628 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 LUC7L3O95232 432 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 WNT1P04628 370 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 VAV1P15498 845 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLC8A1P32418 973 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CTSKP43235 329 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 GPD2P43304 727 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms