RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GNSP15586 552 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 TACR2P21452 398 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CCR1P32246 355 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 KRT9P35527 623 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 GABRB2P47870 512 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 VASPP50552 380 aaPredicted RBP17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 SLC6A3Q01959 620 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CDH18Q13634 790 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 TAF5Q15542 800 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 HNRNPA1L2Q32P51 320 aaKnown RBP17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PTPN20Q4JDL3 420 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CDKAL1Q5VV42 579 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 FAM183BPQ6ZVS7 135 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CCDC117Q8IWD4 279 aaPredicted RBP17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 DEFB106AQ8N104 65 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ZDHHC5Q9C0B5 715 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 SAMSN1Q9NSI8 373 aaKnown RBP17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 DNAAF2Q9NVR5 837 aaKnown RBP17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 SLC12A6Q9UHW9 1150 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 XPO7Q9UIA9 1087 aaKnown RBP17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 DAAM1Q9Y4D1 1078 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CEP83Q9Y592 693 aa17.68■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ERBB2P04626 1255 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 UCHL3P15374 230 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 NOS2P35228 1153 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CSKP41240 450 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 SEMA3BQ13214 749 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 SLC14A1Q13336 389 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 DRAP1Q14919 205 aaPredicted RBP17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 C5orf22Q49AR2 442 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 FSCBQ5H9T9 825 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PITRM1Q5JRX3 1037 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PIP4P1Q86T03 277 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 LGI2Q8N0V4 545 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 DEFB119Q8N690 84 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 C1orf216Q8TAB5 229 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 NT5C3BQ969T7 300 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ERLEC1Q96DZ1 483 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PGAP3Q96FM1 320 aaPredicted RBP17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 MRGPRX3Q96LB0 322 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 GPR174Q9BXC1 333 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 RSPH9Q9H1X1 276 aaPredicted RBP17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 KIAA1522Q9P206 1035 aaPredicted RBP17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 STIM2Q9P246 746 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 FHOD1Q9Y613 1164 aa17.67■□□□□ 0.42
MAP1LC3B-208ENST00000570189 A0A1B0GTW7 788 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 A0A1B0GVM2 712 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 TARSL2A2RTX5 802 aaKnown RBP17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 TCAF2A6NFQ2 919 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 F5H5T6 163 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 GJB3O75712 270 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 MOCS3O95396 460 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 LSM8O95777 96 aaKnown RBP17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 MOCS2O96007 188 aaPredicted RBP17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CFIP05156 583 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CYP11B1P15538 503 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ABCB4P21439 1286 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 NOVA1P51513 510 aaKnown RBP17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PLK1P53350 603 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 OXCT1P55809 520 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 RPS14P62263 151 aaKnown RBP17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PLEKHG6Q3KR16 790 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ACBD5Q5T8D3 534 aaPredicted RBP17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 SH3PXD2AQ5TCZ1 1133 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 RAP1GAP2Q684P5 730 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PSAPL1Q6NUJ1 521 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 USP30Q70CQ3 517 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CHSY1Q86X52 802 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 PASD1Q8IV76 773 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CARNMT1Q8N4J0 409 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 TMEM35BQ8NCS4 154 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 STK33Q9BYT3 514 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 FAM204AQ9H8W3 233 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 OSGEPQ9NPF4 335 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 DDIT4Q9NX09 232 aa17.66■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CHD8Q9HCK8 2581 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 C10orf142B7Z368 130 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 F8VZ95 297 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 H0Y626 953 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 MATKP42679 507 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ST8SIA6P61647 398 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 SULT2A1Q06520 285 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 TTC31Q49AM3 519 aaPredicted RBP17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 RABGAP1LQ5R372 815 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ZNF776Q68DI1 518 aaPredicted RBP17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 OR6B2Q6IFH4 312 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ARCQ7LC44 396 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ZNF677Q86XU0 584 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 RGL4Q8IZJ4 473 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 CFAP52Q8N1V2 620 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 GBP4Q96PP9 640 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 NPY6RQ99463 290 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ANGPTL2Q9UKU9 493 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 ERVW-1Q9UQF0 538 aa17.65■□□□□ 0.42
MAP1LC3B-208ENST00000570189 TP53BP1Q12888 1972 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 EPG5Q9HCE0 2579 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MEI4A8MW99 385 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 OPHN1O60890 802 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms