RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 SGK2Q9HBY8 427 aa12.84□□□□□ -0.35
SCAMP2-212ENST00000569904 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
SCAMP2-212ENST00000569904 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.84□□□□□ -0.35
SCAMP2-212ENST00000569904 DMXL2Q8TDJ6 3036 aa12.84□□□□□ -0.35
SCAMP2-212ENST00000569904 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.35
SCAMP2-212ENST00000569904 SH3BP5O60239 455 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 LETM1O95202 739 aaPredicted RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 LUC7L3O95232 432 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 CER1O95813 267 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 DNTTP04053 509 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 SRPRAP08240 638 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 KRT5P13647 590 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 SPINK2P20155 84 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 UBE2HP62256 183 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 RPS24P62847 133 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 PDCLQ13371 301 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 HNRNPA1L2Q32P51 320 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 FSCBQ5H9T9 825 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 IRF2BP1Q8IU81 584 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 NAXDQ8IW45 347 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 WDTC1Q8N5D0 677 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 ZNF366Q8N895 744 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 BAHD1Q8TBE0 780 aaPredicted RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 SHC3Q92529 594 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 PRMT1Q99873 361 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 ORAI3Q9BRQ5 295 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 BTBD1Q9H0C5 482 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 C6orf106Q9H6K1 298 aaPredicted RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 ST7Q9NRC1 585 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 ASNSD1Q9NWL6 643 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 APEX2Q9UBZ4 518 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 EIF2B4Q9UI10 523 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 PCOLCE2Q9UKZ9 415 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 PCDHGB2Q9Y5G2 931 aa12.83□□□□□ -0.36
SCAMP2-212ENST00000569904 CHD6Q8TD26 2715 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 KCNU1A8MYU2 1149 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 CAPN9O14815 690 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 THAP12O43422 761 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 HYAL3O43820 417 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 SEMA4FO95754 770 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 TRUB2O95900 331 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 SLC9A1P19634 815 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 RDXP35241 583 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 CSKP41240 450 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 MATKP42679 507 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 GRIA4P48058 902 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 VASPP50552 380 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 AFF3P51826 1226 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 PLK1P53350 603 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 SLC12A1Q13621 1099 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 TRIP6Q15654 476 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 TTC31Q49AM3 519 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 DCAF6Q58WW2 860 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 PITRM1Q5JRX3 1037 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 C9orf64Q5T6V5 341 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 CACUL1Q86Y37 369 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 ADAMTS14Q8WXS8 1223 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 BIRC7Q96CA5 298 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 CAMK1GQ96NX5 476 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 SLC2A13Q96QE2 648 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 MIR1-1HGQ9H1L0 117 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 ACP6Q9NPH0 428 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 KIAA1522Q9P206 1035 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 STIM2Q9P246 746 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 ADAMTS1Q9UHI8 967 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 XPO7Q9UIA9 1087 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 ZMIZ1Q9ULJ6 1067 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 SLCO1B1Q9Y6L6 691 aa12.82□□□□□ -0.36
SCAMP2-212ENST00000569904 SIN3BO75182 1162 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 DKK1O94907 266 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 APOEP02649 317 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 CAPNS1P04632 268 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 IGHV4-34P06331 123 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 TACR2P21452 398 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 CD27P26842 260 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 PON1P27169 355 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 ST8SIA6P61647 398 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 MTA1Q13330 715 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 CDH18Q13634 790 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 EXOC3L4Q17RC7 722 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 HLA-BQ31612 363 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 TTC39BQ5VTQ0 682 aaPredicted RBP12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 GJB7Q6PEY0 223 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 GBP6Q6ZN66 633 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 FAM124AQ86V42 546 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 CFAP52Q8N1V2 620 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 CARNMT1Q8N4J0 409 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 ATP6V0D2Q8N8Y2 350 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 MLKLQ8NB16 471 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 ADAM32Q8TC27 787 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 FAM131CQ96AQ9 280 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 CPXM1Q96SM3 734 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 CRACR2AQ9BSW2 395 aa12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
SCAMP2-212ENST00000569904 GAREM1Q9H706 876 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms