RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 TSSK4Q6SA08 328 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 LRSAM1Q6UWE0 723 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 TPGS1Q6ZTW0 290 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 PAQR9Q6ZVX9 377 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 GPRIN1Q7Z2K8 1008 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 CCDC186Q7Z3E2 898 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 CACNA2D4Q7Z3S7 1137 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-219ENST00000569882 DENND1CQ8IV53 801 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 ARHGEF19Q8IW93 802 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 ARMC10Q8N2F6 343 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 SYNPOQ8N3V7 929 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 SPEM1Q8N4L4 309 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 NAT16Q8N8M0 369 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 NEK11Q8NG66 645 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 OTUB2Q96DC9 234 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 PNKPQ96T60 521 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 DDX50Q9BQ39 737 aaKnown RBP5.04□□□□□ -1.6
CNOT1-219ENST00000569882 LSM14BQ9BX40 385 aaKnown RBP5.04□□□□□ -1.6
CNOT1-219ENST00000569882 FAM126AQ9BYI3 521 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-219ENST00000569882 KRTAP4-5Q9BYR2 181 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 RNF38Q9H0F5 515 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 VPS16Q9H269 839 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 NDST4Q9H3R1 872 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 CSNK1G1Q9HCP0 422 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 ARHGEF4Q9NR80 690 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 ABCC13Q9NSE7 274 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 IGSF5Q9NSI5 407 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 RBM12Q9NTZ6 932 aaKnown RBP5.04□□□□□ -1.6
CNOT1-219ENST00000569882 PCMTD2Q9NV79 361 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 DNAJC17Q9NVM6 304 aaKnown RBP5.04□□□□□ -1.6
CNOT1-219ENST00000569882 TAB2Q9NYJ8 693 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 MARCH2Q9P0N8 246 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 WDR35Q9P2L0 1181 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 DEC1Q9P2X7 70 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 DNAJC12Q9UKB3 198 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 FBXO4Q9UKT5 387 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 ZNF510Q9Y2H8 683 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 R4GN57 208 aa5.04□□□□□ -1.6
CNOT1-219ENST00000569882 COL4A3Q01955 1670 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SYNJ2BP-COX16A0A087WUM0 186 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 GTPBP10A4D1E9 387 aaKnown RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 H3BRJ5 948 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 O00370 1275 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 PMM2O15305 246 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TBX18O95935 607 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 MOCS2O96007 188 aaPredicted RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SERPINC1P01008 464 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 EGFP01133 1207 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 LMNAP02545 664 aaKnown RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 APOEP02649 317 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CYP17A1P05093 508 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CCDC172P0C7W6 258 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SP9P0CG40 484 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 NCAM1P13591 858 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TCF3P15923 654 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SLC9A1P19634 815 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CORO1AP31146 461 aaKnown RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 GBP1P32455 592 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 GJA4P35212 333 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SLC11A2P49281 568 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 GALK1P51570 392 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 UBXN1Q04323 297 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TCF15Q12870 199 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 STARD3Q14849 445 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 E2F5Q15329 346 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 DHCR24Q15392 516 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CNGA2Q16280 664 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 C2orf27AQ580R0 203 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TCP11X2Q5H9J9 407 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 LY6G5CQ5SRR4 150 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 C10orf76Q5T2E6 689 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 BSPRYQ5W0U4 402 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 GJB7Q6PEY0 223 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 LCLAT1Q6UWP7 414 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CLEC17AQ6ZS10 378 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 Q6ZS52 159 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TOGARAM2Q6ZUX3 1019 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SND1Q7KZF4 910 aaKnown RBP eCLIP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TRMT11Q7Z4G4 463 aaKnown RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 PASD1Q8IV76 773 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 FMNL3Q8IVF7 1028 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 BBS7Q8IWZ6 715 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CCDC33Q8N5R6 958 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 AOPEPQ8N6M6 819 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 ZMIZ2Q8NF64 920 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TSTD1Q8NFU3 115 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 RPLP0P6Q8NHW5 317 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 GPT2Q8TD30 523 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 DDI1Q8WTU0 396 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 UCMAQ8WVF2 138 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 KAT5Q92993 513 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CHFRQ96EP1 664 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 LRRC3BQ96PB8 259 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 MED15Q96RN5 788 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 FAM83CQ9BQN1 747 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 DDX23Q9BUQ8 820 aaKnown RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 UBXN6Q9BZV1 441 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms