RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-221	ENST00000569720	GANC	Q8TET4	914 aa		13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	TTC17	Q96AE7	1141 aa		13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	FCRL2	Q96LA5	508 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	OSGEP	Q9NPF4	335 aa		13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	KIAA1468	Q9P260	1216 aa		13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	PCOLCE2	Q9UKZ9	415 aa		13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	CTNND2	Q9UQB3	1225 aa		13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	WDFY3	Q8IZQ1	3526 aa		13.61	□□□□□ -0.23
SPG7-221	ENST00000569720	CABIN1	Q9Y6J0	2220 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	TP53BP1	Q12888	1972 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	SRRM3	A6NNA2	597 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	FLRT2	O43155	660 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	FSBP	O95073	299 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	FGFR1OP	O95684	399 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	MOCS2	O96007	188 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	CALCA	P01258	141 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	CD27	P26842	260 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	CSK	P41240	450 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	GPD2	P43304	727 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	GRIA4	P48058	902 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	RPL34	P49207	117 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	MARS	P56192	900 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	BNC1	Q01954	994 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	PAK1	Q13153	545 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	MEA1	Q16626	185 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	MS4A13	Q5J8X5	152 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	NADSYN1	Q6IA69	706 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	USP30	Q70CQ3	517 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	BEND5	Q7L4P6	421 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	ADAT2	Q7Z6V5	191 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	GLRX5	Q86SX6	157 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	PNPLA1	Q8N8W4	532 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	KDM1B	Q8NB78	822 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	RHBDD1	Q8TEB9	315 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	FAM81B	Q96LP2	452 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	CDC6	Q99741	560 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	INTS2	Q9H0H0	1204 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	IL21R	Q9HBE5	538 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	TJP2	Q9UDY2	1190 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	NAALADL1	Q9UQQ1	740 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	CEP83	Q9Y592	693 aa		13.6	□□□□□ -0.23
SPG7-221	ENST00000569720	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	BIN1	O00499	593 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	CBFA2T3	O75081	653 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	FYN	P06241	537 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	SRPRA	P08240	638 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	STX17	P56962	302 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	RPS24	P62847	133 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	MORC3	Q14149	939 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	KIF19	Q2TAC6	998 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	RNF219	Q5W0B1	726 aa	Predicted RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	ENOSF1	Q7L5Y1	443 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	ADAM32	Q8TC27	787 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	STK32A	Q8WU08	396 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	BIRC7	Q96CA5	298 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	SLC39A13	Q96H72	371 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	LMLN	Q96KR4	655 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	KREMEN1	Q96MU8	473 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	MED15	Q96RN5	788 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	SRRT	Q9BXP5	876 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	NUCKS1	Q9H1E3	243 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	PABPC3	Q9H361	631 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	POPDC2	Q9HBU9	364 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	TM9SF3	Q9HD45	589 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	FBXL12	Q9NXK8	326 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	SLC12A6	Q9UHW9	1150 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	CNTN6	Q9UQ52	1028 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	ANKRD6	Q9Y2G4	727 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	PKD1L2	Q7Z442	2459 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	PTPRB	P23467	1997 aa		13.59	□□□□□ -0.23
SPG7-221	ENST00000569720	EDDM13	A0A1B0GTR0	161 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	TARSL2	A2RTX5	802 aa	Known RBP	13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	LRRC72	A6NJI9	287 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	THAP12	O43422	761 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	SIN3B	O75182	1162 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	LUC7L3	O95232	432 aa	Known RBP	13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	BMP6	P22004	513 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	GNA15	P30679	374 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	NNMT	P40261	264 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	YWHAZ	P63104	245 aa	Known RBP	13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	ARID5B	Q14865	1188 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	CST6	Q15828	149 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	DCAF6	Q58WW2	860 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	PITRM1	Q5JRX3	1037 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	SYPL2	Q5VXT5	272 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	DENND1B	Q6P3S1	775 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	DBX2	Q6ZNG2	339 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	TAC4	Q86UU9	113 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	CHSY1	Q86X52	802 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	DHX40	Q8IX18	779 aa	Known RBP	13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	LGI2	Q8N0V4	545 aa		13.58	□□□□□ -0.24
SPG7-221	ENST00000569720	CFAP52	Q8N1V2	620 aa		13.58	□□□□□ -0.24

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