RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 HMGB4Q8WW32 186 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 RXFP2Q8WXD0 754 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 VCPIP1Q96JH7 1222 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 LMLNQ96KR4 655 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 SELENOOQ9BVL4 669 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 TPSD1Q9BZJ3 242 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 KIAA1522Q9P206 1035 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 NCDNQ9UBB6 729 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 PLA2G4CQ9UP65 541 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 HS3ST4Q9Y661 456 aa14.28□□□□□ -0.12
HERPUD1-218ENST00000569569 PI4KAP42356 2102 aa14.27□□□□□ -0.12
HERPUD1-218ENST00000569569 C2CD4BA6NLJ0 364 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 SIGLEC16A6NMB1 481 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 GZMAP12544 262 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 POLR2EP19388 210 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 SDC4P31431 198 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 RDXP35241 583 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 IL12RB1P42701 662 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 ATP11AP98196 1134 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 LMAN2Q12907 356 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF234Q14588 700 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 LPAL2Q16609 132 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 E4F1Q66K89 784 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 MBLAC2Q68D91 279 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF571Q7Z3V5 609 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 SORCS1Q8WY21 1168 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 SYN2Q92777 582 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 ZC3H10Q96K80 434 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 C1orf74Q96LT6 269 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 RPRD1AQ96P16 312 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 HINFPQ9BQA5 517 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 XPO4Q9C0E2 1151 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 SIK2Q9H0K1 926 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 CD248Q9HCU0 757 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 GMEB2Q9UKD1 530 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 CAPN11Q9UMQ6 739 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 RAD54BQ9Y620 910 aa14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 MUC22E2RYF6 1773 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-218ENST00000569569 GVINP1Q7Z2Y8 2422 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF292O60281 2723 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 A0A1B0GVM2 712 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 TCAF2A6NFQ2 919 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 CBFA2T2O43439 604 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 MOCS3O95396 460 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 GJB6O95452 261 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 DLDP09622 509 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 GABRG2P18507 467 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 RFC1P35251 1148 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 PTPN9P43378 593 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 ATXN1P54253 815 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 ZBED6P86452 979 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 SLC12A1Q13621 1099 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 BYSLQ13895 437 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 STARD3Q14849 445 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 C15orf59Q2T9L4 293 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 CCDC14Q49A88 953 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 C5orf22Q49AR2 442 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 FSCBQ5H9T9 825 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 KIAA1211LQ6NV74 962 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 WDR59Q6PJI9 974 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 SERPINA13PQ6UXR4 307 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 STRADAQ7RTN6 431 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 C11orf74Q86VG3 221 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 CCAR2Q8N163 923 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 OLIG1Q8TAK6 271 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 CYB5D2Q8WUJ1 264 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 CPLX3Q8WVH0 158 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 CENPIQ92674 756 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 IGSF8Q969P0 613 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 HAPLN3Q96S86 360 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 ANLNQ9NQW6 1124 aa14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 LUC7L2Q9Y383 392 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 BZW2Q9Y6E2 419 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-218ENST00000569569 FRYLO94915 3013 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 ITIH6Q6UXX5 1313 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 TCRBV5S1A1TA0A578 114 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 ANKRD62A6NC57 917 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 TMCO5BA8MYB1 307 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 I6L893 689 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 SYNCRIPO60506 623 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 ASLP04424 464 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 RETP07949 1114 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 SKILP12757 684 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 GPD1P21695 349 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 RRM1P23921 792 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 OXCT1P55809 520 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 CDO1Q16878 200 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 FUT11Q495W5 492 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 DNAJC24Q6P3W2 148 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 LRRC31Q6UY01 552 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 C14orf80Q86SX3 495 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 KBTBD6Q86V97 674 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms