RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CLNS1AP54105 237 aaKnown RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 MXRA7P84157 204 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SH2D5Q6ZV89 423 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DTX3LQ8TDB6 740 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 STK32AQ8WU08 396 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SENP8Q96LD8 212 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SPATA13Q96N96 652 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 MIPEPQ99797 713 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DUSP16Q9BY84 665 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 LRMDAQ9H2I8 198 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 NUDT5Q9UKK9 219 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 INPP5FQ9Y2H2 1132 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DERAQ9Y315 318 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 PCDHA11Q9Y5I1 949 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 N6AMT1Q9Y5N5 214 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 MYO18AQ92614 2054 aaKnown RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 FCHO1O14526 889 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 TPP1O14773 563 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 POMCP01189 267 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DLDP09622 509 aaKnown RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 ERCC2P18074 760 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 PRKCHP24723 683 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 RIPK1Q13546 671 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 WLSQ5T9L3 541 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CXCL17Q6UXB2 119 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 PAQR9Q6ZVX9 377 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CMC1Q7Z7K0 106 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 ZNF567Q8N184 647 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 FBXO41Q8TF61 875 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 GTF3C2Q8WUA4 911 aaPredicted RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 CENPIQ92674 756 aaPredicted RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 RTP4Q96DX8 246 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 MOCOSQ96EN8 888 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 OXNAD1Q96HP4 312 aaPredicted RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 EPAS1Q99814 870 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 FAM167BQ9BTA0 163 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 PHACTR1Q9C0D0 580 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DENND2DQ9H6A0 471 aaPredicted RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 ZFATQ9P243 1243 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 MORF4L1Q9UBU8 362 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 TMCC3Q9ULS5 477 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 A0A0G2JMZ2 1700 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 MYADML2A6NDP7 307 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 SDR42E2A6NKP2 422 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 H3BRJ5 948 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 TRDMT1O14717 391 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 XPO1O14980 1071 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 ATP5HO75947 161 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 PGK1P00558 417 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 PTPN4P29074 926 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 NR2C2P49116 596 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 SCNN1GP51170 649 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 CDK16Q00536 496 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 FAM110CQ1W6H9 321 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 N4BP2L1Q5TBK1 243 aaPredicted RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 RWDD4Q6NW29 188 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 RASSF3Q86WH2 238 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 C2orf69Q8N8R5 385 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 STKLD1Q8NE28 680 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 HSFY1Q96LI6 401 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 EBF4Q9BQW3 602 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 C11orf84Q9BUA3 381 aaPredicted RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 CRTAC1Q9NQ79 661 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 TMEM30AQ9NV96 361 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 MIOSQ9NXC5 875 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 MCM8Q9UJA3 840 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 STAP1Q9ULZ2 295 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 GNEQ9Y223 722 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 ANK1P16157 1881 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 IQCA1LA6NCM1 817 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 DHRS4L1P0CG22 281 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 SKIV2L2P42285 1042 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 TPI1P60174 286 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 FASTKD1Q53R41 847 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 GNASQ5JWF2 1037 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 SPRYD7Q5W111 196 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 STRADAQ7RTN6 431 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 RSPH3Q86UC2 560 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 TNS4Q8IZW8 715 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 ZNF669Q96BR6 464 aaPredicted RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 PCED1BQ96HM7 432 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 NSL1Q96IY1 281 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 RSRC1Q96IZ7 334 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 L3MBTL3Q96JM7 780 aaPredicted RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 PPP1R36Q96LQ0 422 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 CADM1Q9BY67 442 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 XAB2Q9HCS7 855 aaKnown RBP8.99□□□□□ -0.97
LINC00558-201ENST00000569422 XPNPEP3Q9NQH7 507 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 C15orf41Q9Y2V0 281 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 TRIP11Q15643 1979 aa8.99□□□□□ -0.97
LINC00558-201ENST00000569422 I6L893 689 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ITM2AO43736 263 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TSHRP16473 764 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TYK2P29597 1187 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 NOS2P35228 1153 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 PNPLA4P41247 253 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 STX3Q13277 289 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms