RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZDHHC17Q8IUH5 632 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 HJURPQ8NCD3 748 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-225ENST00000569245 SORCS1Q8WY21 1168 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 SLC39A13Q96H72 371 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 ZC3H10Q96K80 434 aaKnown RBP14.99□□□□□ -0.01
COMMD4-225ENST00000569245 SLC2A13Q96QE2 648 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 PCDHB18PQ96TA0 734 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 GABRG3Q99928 467 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 DUSP15Q9H1R2 295 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-225ENST00000569245 PARD6AQ9NPB6 346 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 SEMA4GQ9NTN9 838 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 ABCB8Q9NUT2 735 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 SPTLC3Q9NUV7 552 aa14.99□□□□□ -0.01
COMMD4-225ENST00000569245 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.99□□□□□ -0.01
COMMD4-225ENST00000569245 REXO2Q9Y3B8 237 aaKnown RBP14.99□□□□□ -0.01
COMMD4-225ENST00000569245 GFRA2O00451 464 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 LRP3O75074 770 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 LSM8O95777 96 aaKnown RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CYP1A1P04798 512 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CCDC175P0C221 793 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 SLC2A3P11169 496 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 GABRG2P18507 467 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 ABCB4P21439 1286 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 HLA-FP30511 346 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CCR1P32246 355 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 ID4P47928 161 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 PITX1P78337 314 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 LMNB2Q03252 620 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CCDC6Q16204 474 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 MPP7Q5T2T1 576 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 RAP1GAP2Q684P5 730 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 KIAA1211LQ6NV74 962 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 ALKBH5Q6P6C2 394 aaKnown RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CHST9Q7L1S5 443 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CHSY1Q86X52 802 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 MFN1Q8IWA4 741 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 LGI2Q8N0V4 545 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CFAP52Q8N1V2 620 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CARNMT1Q8N4J0 409 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 ATP6V0D2Q8N8Y2 350 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 ZNF557Q8N988 423 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 ACRBPQ8NEB7 543 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 WFIKKN2Q8TEU8 576 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CPA5Q8WXQ8 436 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 C18orf8Q96DM3 657 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 BTN2A3PQ96KV6 586 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 DESI2Q9BSY9 194 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 IRX2Q9BZI1 471 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 THAP10Q9P2Z0 257 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 XPO7Q9UIA9 1087 aaKnown RBP14.98□□□□□ -0.01
COMMD4-225ENST00000569245 GGA2Q9UJY4 613 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 PLA2G4CQ9UP65 541 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 PPP2R2CQ9Y2T4 447 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 DMXL1Q9Y485 3027 aa14.98□□□□□ -0.01
COMMD4-225ENST00000569245 CCP110O43303 1012 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 ZSCAN12O43309 604 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 DAB1O75553 588 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 EPN2O95208 641 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 IGLV3-25P01717 112 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 PABPC1P11940 636 aaKnown RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 UNGP13051 313 aaPredicted RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 BCKDHBP21953 392 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 TGM1P22735 817 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 CDH5P33151 784 aaPredicted RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 NOS2P35228 1153 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 IL12RB1P42701 662 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 MAGEA1P43355 309 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 RPS24P62847 133 aaKnown RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 CREB5Q02930 508 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 CDH18Q13634 790 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 ZNF234Q14588 700 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 CSRP2Q16527 193 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 FNDC3BQ53EP0 1204 aaKnown RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 MS4A13Q5J8X5 152 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 CCDC122Q5T0U0 273 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 FAM102AQ5T9C2 384 aaPredicted RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 PPP1R2P3Q6NXS1 205 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 SERPINA13PQ6UXR4 307 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 ZNF662Q6ZS27 426 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 LPCAT2Q7L5N7 544 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 SLC26A9Q7LBE3 791 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 AHI1Q8N157 1196 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 CCAR2Q8N163 923 aaKnown RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 ISCUQ9H1K1 167 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 LUC7LQ9NQ29 371 aaKnown RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 SEPT11Q9NVA2 429 aaKnown RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 CALCOCO1Q9P1Z2 691 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 PCDHA13Q9Y5I0 950 aa14.97□□□□□ -0.01
COMMD4-225ENST00000569245 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.97□□□□□ -0.01
COMMD4-225ENST00000569245 KCNU1A8MYU2 1149 aa14.96□□□□□ -0.01
COMMD4-225ENST00000569245 PRR5-ARHGAP8B1AHC4 643 aa14.96□□□□□ -0.01
COMMD4-225ENST00000569245 F5H5T6 163 aa14.96□□□□□ -0.01
COMMD4-225ENST00000569245 H0Y626 953 aa14.96□□□□□ -0.01
COMMD4-225ENST00000569245 GOLGA8SH3BPF8 625 aa14.96□□□□□ -0.01
COMMD4-225ENST00000569245 M0QYT0 321 aa14.96□□□□□ -0.01
COMMD4-225ENST00000569245 ATP5BP06576 529 aaKnown RBP14.96□□□□□ -0.01
COMMD4-225ENST00000569245 EPHX1P07099 455 aa14.96□□□□□ -0.01
COMMD4-225ENST00000569245 POLR2EP19388 210 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms