RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SKOR1P84550 965 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 AMPD3Q01432 767 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 TRIP4Q15650 581 aaPredicted RBP9.03□□□□□ -0.96
SMG1-216ENST00000569122 ADGRF1Q5T601 910 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 CLEC20AQ6ZU45 233 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 USP53Q70EK8 1073 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 BRAPQ7Z569 592 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 SCD5Q86SK9 330 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 ZNF366Q8N895 744 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 WDR48Q8TAF3 677 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 MAPK15Q8TD08 544 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 JAKMIP2Q96AA8 810 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 TTC17Q96AE7 1141 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 KLHDC7BQ96G42 594 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 P2RY11Q96G91 374 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 DUSP16Q9BY84 665 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 UBXN6Q9BZV1 441 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 TRIM4Q9C037 500 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 EBF2Q9HAK2 575 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 FAM49BQ9NUQ9 324 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 KLHL11Q9NVR0 708 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 STOML2Q9UJZ1 356 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 HBS1LQ9Y450 684 aaKnown RBP9.03□□□□□ -0.96
SMG1-216ENST00000569122 MYH11P35749 1972 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 COL12A1Q99715 3063 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 EDDM13A0A1B0GTR0 161 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ENO4A6NNW6 628 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 TRIM38O00635 465 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 SLC7A4O43246 635 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 SIN3BO75182 1162 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 KIF20AO95235 890 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 MOCS3O95396 460 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 SRPRAP08240 638 aaKnown RBP9.02□□□□□ -0.97
SMG1-216ENST00000569122 DGKAP23743 735 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 NNMTP40261 264 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 STAT6P42226 847 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 AFMP43652 599 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ADPRHP54922 357 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 CCDC15Q0P6D6 951 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 KCNJ12Q14500 433 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ISXQ2M1V0 245 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ZSCAN23Q3MJ62 389 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 SETMARQ53H47 684 aaPredicted RBP9.02□□□□□ -0.97
SMG1-216ENST00000569122 RNF219Q5W0B1 726 aaPredicted RBP9.02□□□□□ -0.97
SMG1-216ENST00000569122 SCARA5Q6ZMJ2 495 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 GPRIN1Q7Z2K8 1008 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 DSG4Q86SJ6 1040 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 SPATS2Q86XZ4 545 aaKnown RBP9.02□□□□□ -0.97
SMG1-216ENST00000569122 MMAAQ8IVH4 418 aaKnown RBP9.02□□□□□ -0.97
SMG1-216ENST00000569122 C12orf29Q8N999 325 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 EXD3Q8N9H8 876 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ZSCAN1Q8NBB4 408 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 GOLGA5Q8TBA6 731 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 FAM174AQ8TBP5 190 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ZNF507Q8TCN5 953 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ZNF516Q92618 1163 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 SGF29Q96ES7 293 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 IFT43Q96FT9 208 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 EPSTI1Q96J88 318 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 DDX50Q9BQ39 737 aaKnown RBP9.02□□□□□ -0.97
SMG1-216ENST00000569122 NT5C1AQ9BXI3 368 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 AGPAT3Q9NRZ7 376 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 NLGN3Q9NZ94 848 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 DACH1Q9UI36 760 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 ATXN7L1Q9ULK2 861 aaPredicted RBP9.02□□□□□ -0.97
SMG1-216ENST00000569122 SATB2Q9UPW6 733 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 UBE4BO95155 1302 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 PTPN13Q12923 2485 aa9.02□□□□□ -0.97
SMG1-216ENST00000569122 USP9XQ93008 2570 aaPredicted RBP9.01□□□□□ -0.97
SMG1-216ENST00000569122 A0A1B0GVM2 712 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 C10orf142B7Z368 130 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 EXOC3O60645 756 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 PPFIA2O75334 1257 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 TCEA3O75764 348 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 SLC11A2P49281 568 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 CYP2J2P51589 502 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 YWHAGP61981 247 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMG1-216ENST00000569122 C4orf17Q53FE4 359 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 C3orf38Q5JPI3 329 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 C9orf64Q5T6V5 341 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 FAM46CQ5VWP2 391 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 RBM44Q6ZP01 1051 aaKnown RBP9.01□□□□□ -0.97
SMG1-216ENST00000569122 TMC6Q7Z403 805 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 CLEC14AQ86T13 490 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 DCP2Q8IU60 420 aaKnown RBP9.01□□□□□ -0.97
SMG1-216ENST00000569122 UNC45BQ8IWX7 931 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 SLC25A45Q8N413 288 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 TTC39CQ8N584 583 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 WDR36Q8NI36 951 aaKnown RBP9.01□□□□□ -0.97
SMG1-216ENST00000569122 RNF139Q8WU17 664 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 IMPG2Q9BZV3 1241 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 OSBPL2Q9H1P3 480 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 CYP3A43Q9HB55 503 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 SERGEFQ9UGK8 458 aa9.01□□□□□ -0.97
SMG1-216ENST00000569122 SRPRBQ9Y5M8 271 aaKnown RBP9.01□□□□□ -0.97
SMG1-216ENST00000569122 CDRT15L2A8MXV6 281 aa9□□□□□ -0.97
SMG1-216ENST00000569122 TMX2-CTNND1H3BSU7 103 aa9□□□□□ -0.97
SMG1-216ENST00000569122 WNT9AO14904 365 aa9□□□□□ -0.97
SMG1-216ENST00000569122 SCAMP1O15126 338 aa9□□□□□ -0.97
SMG1-216ENST00000569122 SDC3O75056 442 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms