RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 QKIQ96PU8 341 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDH11-214ENST00000568340 KRT12Q99456 494 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 EPAS1Q99814 870 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 FRMD8P1Q9BZ68 369 aaPredicted RBP10.67□□□□□ -0.7
CDH11-214ENST00000568340 EPC1Q9H2F5 836 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 ADAM7Q9H2U9 754 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 TRPV4Q9HBA0 871 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 TMEM248Q9NWD8 314 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 SMPD4Q9NXE4 827 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 DMGDHQ9UI17 866 aaKnown RBP10.67□□□□□ -0.7
CDH11-214ENST00000568340 ZMYM5Q9UJ78 669 aa10.67□□□□□ -0.7
CDH11-214ENST00000568340 CHD5Q8TDI0 1954 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 ZSCAN5CA6NGD5 496 aaPredicted RBP10.66□□□□□ -0.7
CDH11-214ENST00000568340 LEFTY2O00292 366 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 FGF10O15520 208 aaPredicted RBP10.66□□□□□ -0.7
CDH11-214ENST00000568340 CREB3O43889 395 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 CKMP06732 381 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 ITGAVP06756 1048 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 RHOQP17081 205 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 HOXB8P17481 243 aaPredicted RBP10.66□□□□□ -0.7
CDH11-214ENST00000568340 IVDP26440 423 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 EPHB2P29323 1055 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 ECHS1P30084 290 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 ARL4AP40617 200 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 KCNJ1P48048 391 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 GDF10P55107 478 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 ERCC6LQ2NKX8 1250 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 ACBD5Q5T8D3 534 aaPredicted RBP10.66□□□□□ -0.7
CDH11-214ENST00000568340 ELMSAN1Q6PJG2 1045 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 DENND1CQ8IV53 801 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 CPXM2Q8N436 756 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 ALLCQ8N6M5 410 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 KIAA1958Q8N8K9 716 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 OR52K2Q8NGK3 314 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 SH3RF2Q8TEC5 729 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 SUSD6Q92537 303 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 PPP2R3CQ969Q6 453 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 LMLNQ96KR4 655 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 GCNAQ96QF7 691 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 PNKPQ96T60 521 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 LRRC1Q9BTT6 524 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 MPP6Q9NZW5 540 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 CFAP97Q9P2B7 532 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 AMACRQ9UHK6 382 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 VANGL2Q9ULK5 521 aa10.66□□□□□ -0.7
CDH11-214ENST00000568340 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 ZNF197O14709 1029 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 SCAMP3O14828 347 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 TTI1O43156 1089 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 MAP3K6O95382 1288 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 PEX11BO96011 259 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 IRF1P10914 325 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 ZFXP17010 805 aaPredicted RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 NR2C2P49116 596 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 NRLP54845 237 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 RPS24P62847 133 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 XRCC4Q13426 336 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 TEX35Q5T0J7 233 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 ADGRF1Q5T601 910 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 CXorf57Q6NSI4 855 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 RFWD3Q6PCD5 774 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 CCDC137Q6PK04 289 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 CHSY1Q86X52 802 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 CIR1Q86X95 450 aaPredicted RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 JAMLQ86YT9 394 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 BBS7Q8IWZ6 715 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 KLHL7Q8IXQ5 586 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 UMODL1-AS1Q8N2C9 162 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 NETO2Q8NC67 525 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 ING5Q8WYH8 240 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 FGF13Q92913 245 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 RNF34Q969K3 372 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 MAGOHBQ96A72 148 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 HDAC11Q96DB2 347 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 PABPC5Q96DU9 382 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 ASIC4Q96FT7 647 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 ASB16Q96NS5 453 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 TRIM51Q9BSJ1 452 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 COL25A1Q9BXS0 654 aaPredicted RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 ZYG11BQ9C0D3 744 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 SIK2Q9H0K1 926 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 IGFLR1Q9H665 355 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 C10orf88Q9H8K7 445 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 GDF3Q9NR23 364 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDH11-214ENST00000568340 RAB21Q9UL25 225 aa10.65□□□□□ -0.7
CDH11-214ENST00000568340 DRG1Q9Y295 367 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 MRPS23Q9Y3D9 190 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 NYNRINQ9P2P1 1898 aaKnown RBP10.65□□□□□ -0.7
CDH11-214ENST00000568340 E2F8A0AVK6 867 aa10.64□□□□□ -0.71
CDH11-214ENST00000568340 BCLAF3A2AJT9 711 aaKnown RBP10.64□□□□□ -0.71
CDH11-214ENST00000568340 TARSL2A2RTX5 802 aaKnown RBP10.64□□□□□ -0.71
CDH11-214ENST00000568340 RBP3P10745 1247 aa10.64□□□□□ -0.71
CDH11-214ENST00000568340 HOXD9P28356 352 aaPredicted RBP10.64□□□□□ -0.71
CDH11-214ENST00000568340 TNFRSF8P28908 595 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms