RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 HEXIM2Q96MH2 286 aaKnown RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 CATSPER2Q96P56 530 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 SLC2A11Q9BYW1 496 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 STRADBQ9C0K7 418 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 GOLPH3LQ9H4A5 285 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 CRTAC1Q9NQ79 661 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 PRSS16Q9NQE7 514 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 FZD4Q9ULV1 537 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 A0A1W2PQ27 194 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 A0A1W2PQ64 194 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 TMX2-CTNND1H3BSU7 103 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 PIGRP01833 764 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 PDGFRBP09619 1106 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 JMJD7P0C870 316 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 PFKFB1P16118 471 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 PLCG1P19174 1290 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 GNLYP22749 145 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 UQCRFS1P47985 274 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 RAD51AP2Q09MP3 1159 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 SPIDRQ14159 915 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 KCNJ12Q14500 433 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
CAPN3-216ENST00000567071 ECM1Q16610 540 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 SOWAHAQ2M3V2 549 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 LACTB2Q53H82 288 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-216ENST00000567071 RESP18Q5W5W9 173 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 CCDC73Q6ZRK6 1079 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 C1orf186Q6ZWK4 172 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 SV2AQ7L0J3 742 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 RAB11FIP2Q7L804 512 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 EFL1Q7Z2Z2 1120 aaKnown RBP10.13□□□□□ -0.79
CAPN3-216ENST00000567071 FAM114A1Q8IWE2 563 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 SLC34A3Q8N130 599 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 CSGALNACT2Q8N6G5 542 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 SNX29Q8TEQ0 813 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 WFIKKN2Q8TEU8 576 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 EPSTI1Q96J88 318 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 KLF16Q9BXK1 252 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-216ENST00000567071 TMEM245Q9H330 911 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 SYNDIG1Q9H7V2 258 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 TLR8Q9NR97 1041 aaKnown RBP10.13□□□□□ -0.79
CAPN3-216ENST00000567071 UCKL1Q9NWZ5 548 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 DONSONQ9NYP3 566 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 ITGA11Q9UKX5 1188 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 DMTF1Q9Y222 760 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 RP1P56715 2156 aa10.13□□□□□ -0.79
CAPN3-216ENST00000567071 UBE4BO95155 1302 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 DOCK9Q9BZ29 2069 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3DA0A087WVF3 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3IA0A087WXS9 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3EA0A087X179 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3KA0A087X1G2 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 A0A1W2PP55 124 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3FA6NER0 549 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3LB9A6J9 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 E9PMD0 336 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 NVLO15381 856 aaKnown RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 GREM1O60565 184 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 PIAS2O75928 621 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 MBD3O95983 291 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 ATP5BP06576 529 aaKnown RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3HP0C7X1 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 CMA1P23946 247 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 LMO2P25791 158 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 SLC6A4P31645 630 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 ABCD1P33897 745 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 UGT1A5P35504 534 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 LONP1P36776 959 aaKnown RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 NDUFA8P51970 172 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 NCKAP1LP55160 1127 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 RBP5P82980 135 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 PDE4CQ08493 712 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 CDKN3Q16667 212 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 FYB2Q5VWT5 728 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3GQ6DHY5 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 SLFN12LQ6IEE8 588 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3CQ6IPX1 549 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 ZCCHC8Q6NZY4 707 aaKnown RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 SND1Q7KZF4 910 aaKnown RBP eCLIP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TBC1D3Q8IZP1 549 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 PDILTQ8N807 584 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 TEX19Q8NA77 164 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 OR14C36Q8NHC7 312 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 RASSF8Q8NHQ8 419 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 KLHDC7BQ96G42 594 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 RAB34Q9BZG1 259 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 RSPH9Q9H1X1 276 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 NEUROG2Q9H2A3 272 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 SNX25Q9H3E2 840 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 EPB41L5Q9HCM4 733 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 KLHL11Q9NVR0 708 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 COMMD8Q9NX08 183 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 AGO2Q9UKV8 859 aaKnown RBP10.12□□□□□ -0.79
CAPN3-216ENST00000567071 PHTF1Q9UMS5 762 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 SDK2Q58EX2 2172 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 CCDC168Q8NDH2 2452 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 HIVEP3Q5T1R4 2406 aa10.12□□□□□ -0.79
CAPN3-216ENST00000567071 COL27A1Q8IZC6 1860 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms