RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SLC22A2O15244 555 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 KLHL41O60662 606 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 TRMUO75648 421 aaKnown RBP16.07■□□□□ 0.16
COMMD4-215ENST00000566843 PROZP22891 400 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 MAGEA8P43361 318 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 CDKL1Q00532 357 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 ORC1Q13415 861 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 STILQ15468 1287 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 CA9Q16790 459 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 FAM183BPQ6ZVS7 135 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 KYQ8NBH2 561 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 MAPK15Q8TD08 544 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 QKIQ96PU8 341 aaKnown RBP eCLIP16.07■□□□□ 0.16
COMMD4-215ENST00000566843 PRPF18Q99633 342 aaKnown RBP16.07■□□□□ 0.16
COMMD4-215ENST00000566843 SNRNP25Q9BV90 132 aaKnown RBP16.07■□□□□ 0.16
COMMD4-215ENST00000566843 HMGXB4Q9UGU5 601 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 APPL1Q9UKG1 709 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 MAP3K6O95382 1288 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 VDRP11473 427 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 XRCC1P18887 633 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-215ENST00000566843 THOP1P52888 689 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 SP2Q02086 613 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 FLOT2Q14254 428 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 PPM1JQ5JR12 505 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 IYDQ6PHW0 289 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 BNC2Q6ZN30 1099 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-215ENST00000566843 DSELQ8IZU8 1212 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 ZNF781Q8N8C0 355 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 LRRN4Q8WUT4 740 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 FERMT1Q9BQL6 677 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 MRPL1Q9BYD6 325 aaKnown RBP16.07■□□□□ 0.16
COMMD4-215ENST00000566843 MORF4L1Q9UBU8 362 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 SIX4Q9UIU6 781 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 PSAT1Q9Y617 370 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 RPS6KL1Q9Y6S9 549 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 EGFRP00533 1210 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 PGAM1P18669 254 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 CDH2P19022 906 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 NUDT2P50583 147 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 MRPS22P82650 360 aaKnown RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 SLC10A2Q12908 348 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 CDO1Q16878 200 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 ACBD5Q5T8D3 534 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 OR6B2Q6IFH4 312 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 LRRC8BQ6P9F7 803 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 LRRC43Q8N309 656 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 CPSF7Q8N684 471 aaKnown RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 RP9Q8TA86 221 aaKnown RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 STON2Q8WXE9 905 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 ARNTL2Q8WYA1 636 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 ATG4CQ96DT6 458 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 PIWIL1Q96J94 861 aaKnown RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 OR52B2Q96RD2 323 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 PKP2Q99959 881 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 OXCT2Q9BYC2 517 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 COPS7BQ9H9Q2 264 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 GBA2Q9HCG7 927 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 MAN1C1Q9NR34 630 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 RHBDL2Q9NX52 303 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 SCAF8Q9UPN6 1271 aaKnown RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 AK5Q9Y6K8 562 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 H0YJX3 145 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 H3BSA7 217 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 AIM2O14862 343 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 CYP2F1P24903 491 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 C6orf52Q5T4I8 152 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 SNX32Q86XE0 403 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 TMEM102Q8N9M5 508 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 REPS2Q8NFH8 660 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 UBA3Q8TBC4 463 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 WNK4Q96J92 1243 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 CLMNQ96JQ2 1002 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 CDRT15Q96T59 188 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 ZNF385DQ9H6B1 395 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 RPAP3Q9H6T3 665 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-215ENST00000566843 TCF7L2Q9NQB0 619 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 ADAM28Q9UKQ2 775 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 PACSIN3Q9UKS6 424 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 MGAMO43451 1857 aa16.06■□□□□ 0.16
COMMD4-215ENST00000566843 MAFO75444 373 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 BCAS2O75934 225 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 HSPA4LO95757 839 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 CD1EP15812 388 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 TYK2P29597 1187 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 ADSLP30566 484 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 ALDH3B2P48448 385 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 NR2C2P49116 596 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 HERC3Q15034 1050 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 SCYL2Q6P3W7 929 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 ISLR2Q6UXK2 745 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 NAPRTQ6XQN6 538 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 SETD3Q86TU7 594 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 ERI1Q8IV48 349 aaKnown RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 PGAM4Q8N0Y7 254 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 PRPF31Q8WWY3 499 aaKnown RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 CYP3A43Q9HB55 503 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 EIF2B3Q9NR50 452 aaKnown RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 hCG_2014768A0A024R1R8 64 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms