RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CAB39LQ9H9S4 337 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SUPT7LO94864 414 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 MAPRE1Q15691 268 aaKnown RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 SLC25A52Q3SY17 297 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 PPM1JQ5JR12 505 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SDHAF4Q5VUM1 108 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 PDPK2PQ6A1A2 396 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 CHADLQ6NUI6 762 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 RHBDF2Q6PJF5 856 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 PSTKQ8IV42 348 aaKnown RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 UNC5BQ8IZJ1 945 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SPATA6LQ8N4H0 392 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 ICA1LQ8NDH6 482 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 KCNK16Q96T55 309 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 NMUR2Q9GZQ4 415 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 ADAM7Q9H2U9 754 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 EPB41L4BQ9H329 900 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SAR1AQ9NR31 198 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SLC17A6Q9P2U8 582 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 CDYLQ9Y232 598 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 E5RI56 91 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 CLGNO14967 610 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 NCAM2O15394 837 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 ENDOD1O94919 500 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 S100BP04271 92 aaPredicted RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 IRF1P10914 325 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 CCR1P32246 355 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 NAGLUP54802 743 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 LILRA4P59901 499 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 TCHHL1Q5QJ38 904 aaPredicted RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 LRRC8EQ6NSJ5 796 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 GALNT4Q8N4A0 578 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 TDRD5Q8NAT2 981 aaKnown RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 PIWIL2Q8TC59 973 aaKnown RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 PEBP4Q96S96 227 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 UPF3AQ9H1J1 476 aaKnown RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 RNPEPL1Q9HAU8 725 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 TMPRSS4Q9NRS4 437 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SNX10Q9Y5X0 201 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 LAMB1P07942 1786 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SMCHD1A6NHR9 2005 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 SNX2O60749 519 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 RASSF9O75901 435 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 CHEK2O96017 543 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 PROCP04070 461 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 ITGA2BP08514 1039 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 AKR1A1P14550 325 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 GEMP55040 296 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 SLC25A3Q00325 362 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 ZNF252P-AS1Q0IIN9 211 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 UBAP2LQ14157 1087 aaKnown RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 SPRED3Q2MJR0 410 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 PREPLQ4J6C6 727 aaPredicted RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 CERCAMQ5T4B2 595 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 ZNF618Q5T7W0 954 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 SLC26A9Q7LBE3 791 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 ST13P4Q8IZP2 240 aaPredicted RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 RAET1EQ8TD07 263 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 TEKT4Q8WW24 435 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 FBXO32Q969P5 355 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 GLT1D1Q96MS3 346 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 TXLNGYQ9BZA5 131 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 DMAP1Q9NPF5 467 aaPredicted RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 BATF3Q9NR55 127 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 KIF3CO14782 793 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 TRIM13O60858 407 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 F7P08709 466 aaPredicted RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 ADRA1BP35368 520 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 NME5P56597 212 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 MAP2K5Q13163 448 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 FAM83EQ2M2I3 478 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 SEL1L3Q68CR1 1132 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 ZNF470Q6ECI4 717 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 INPP5DQ92835 1189 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 COL2A1P02458 1487 aaPredicted RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 MAST2Q6P0Q8 1798 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 XPO1O14980 1071 aaKnown RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 BUD23O43709 281 aaKnown RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 CD52P31358 61 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 HDAC4P56524 1084 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 KYAT3Q6YP21 454 aaKnown RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 TDRPQ86YL5 185 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 IGDCC3Q8IVU1 814 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 MPP5Q8N3R9 675 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 FAM13CQ8NE31 585 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 MTG1Q9BT17 334 aaPredicted RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 NMRAL1Q9HBL8 299 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 ARHGEF4Q9NR80 690 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 SPATS2LQ9NUQ6 558 aaKnown RBP11.85□□□□□ -0.51
CDH1-210ENST00000566612 DTLQ9NZJ0 730 aa11.85□□□□□ -0.51
CDH1-210ENST00000566612 PLLPQ9Y342 182 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms